Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Gene: AT3G47490

.

Description

HNH endonuclease [Source:NCBI gene (formerly Entrezgene);Acc:823903]

Location

Chromosome 3: 17,498,148-17,501,006 forward strand.

About this gene

This gene has 7 transcripts (splice variants) and 130 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT3G47490-202	AT3G47490.4	1148	254aa	AT3G47490.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LRA7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT3G47490-203	AT3G47490.6	1468	209aa	AT3G47490.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LRA9	-	-
AT3G47490-207	AT3G47490.2	1416	176aa	AT3G47490.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q3EAN6	-	-
AT3G47490-206	AT3G47490.7	1328	189aa	AT3G47490.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LRB0	-	-
AT3G47490-201	AT3G47490.5	1093	209aa	AT3G47490.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LRA9	-	-
AT3G47490-204	AT3G47490.3	1072	215aa	AT3G47490.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4JBJ9	-	-
AT3G47490-205	AT3G47490.1	982	234aa	AT3G47490.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9SN88	-	-

.

Summary

.

.