Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Gene: PCL1 AT3G46640

.

Description

Homeodomain-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:823817]

Gene Synonyms

LUX, LUX ARRHYTHMO, PHYTOCLOCK 1

Location

Chromosome 3: 17,183,042-17,186,959 forward strand.

About this gene

This gene has 3 transcripts (splice variants), 160 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
PCL1-202	AT3G46640.3	1384	324aa	AT3G46640.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4J959	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
PCL1-203	AT3G46640.2	3242	323aa	AT3G46640.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654FDC6 Q9SNB4	-	-
PCL1-201	AT3G46640.1	1845	323aa	AT3G46640.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654FDC6 Q9SNB4	-	-

.

Summary

.

.