Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: SETH6 AT2G47860

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Description

Phototropic-responsive NPH3 family protein [Source:NCBI gene (formerly Entrezgene);Acc:819398]

Gene Synonyms

F17A22.25

Location

Chromosome 2: 19,599,686-19,602,312 forward strand.

About this gene

This gene has 6 transcripts (splice variants), 215 orthologues and 32 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
SETH6-206	AT2G47860.3	2192	658aa	AT2G47860.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4IM54	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
SETH6-201	AT2G47860.2	2530	517aa	AT2G47860.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4IM56	-	-
SETH6-204	AT2G47860.4	2495	444aa	AT2G47860.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8B0G5	-	-
SETH6-205	AT2G47860.6	2493	467aa	AT2G47860.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8B0E1	-	-
SETH6-203	AT2G47860.5	2488	517aa	AT2G47860.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4IM56	-	-
SETH6-202	AT2G47860.1	2398	635aa	AT2G47860.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O82253	-	-

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Summary

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