Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: PIL5 AT2G20180

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Description

phytochrome interacting factor 3-like 5 [Source:NCBI gene (formerly Entrezgene);Acc:816538]

Gene Synonyms

PHY-INTERACTING FACTOR 1, phytochrome interacting factor 3-like 5, PIF1, T2G17.2, T2G17_2

Location

Chromosome 2: 8,704,024-8,707,009 reverse strand.

About this gene

This gene has 8 transcripts (splice variants), 131 orthologues and 40 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
PIL5-201	AT2G20180.2	2088	478aa	AT2G20180.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8GZM7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
PIL5-202	AT2G20180.1	2051	407aa	AT2G20180.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
PIL5-203	AT2G20180.3	1913	478aa	AT2G20180.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8GZM7	-	-
PIL5-207	AT2G20180.6	1903	478aa	AT2G20180.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8GZM7	-	-
PIL5-206	AT2G20180.7	1866	407aa	AT2G20180.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
PIL5-205	AT2G20180.4	1799	478aa	AT2G20180.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8GZM7	-	-
PIL5-204	AT2G20180.5	1762	407aa	AT2G20180.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
PIL5-208	AT2G20180.8	1391	342aa	AT2G20180.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AYE4	-	-

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Summary

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