Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT2G16940

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Description

Splicing factor, CC1-like protein [Source:NCBI gene (formerly Entrezgene);Acc:816197]

Gene Synonyms

F12A24.12, F12A24_12

Location

Chromosome 2: 7,342,607-7,347,464 reverse strand.

About this gene

This gene has 5 transcripts (splice variants), 77 orthologues and 56 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT2G16940-203	AT2G16940.2	2278	610aa	AT2G16940.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4ILE1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT2G16940-204	AT2G16940.4	2568	420aa	AT2G16940.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8LPG3	-	-
AT2G16940-202	AT2G16940.3	2245	599aa	AT2G16940.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4ILE0	-	-
AT2G16940-205	AT2G16940.1	2187	561aa	AT2G16940.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178VT14 Q9ZVW9	-	-
AT2G16940-201	AT2G16940.5	1591	420aa	AT2G16940.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8LPG3	-	-

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Summary

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