Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: HIT1 AT1G50500

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Description

Membrane trafficking VPS53 family protein [Source:NCBI gene (formerly Entrezgene);Acc:841472]

Gene Synonyms

ARABIDOPSIS THALIANA VPS53 HOMOLOG, ATVPS53, HEAT-INTOLERANT 1, VPS53

Location

Chromosome 1: 18,707,924-18,716,118 reverse strand.

About this gene

This gene has 5 transcripts (splice variants), 168 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
HIT1-205	AT1G50500.2	2907	847aa	AT1G50500.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
HIT1-202	AT1G50500.3	3197	828aa	AT1G50500.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S9WKR6 Q0WQF4	-	-
HIT1-201	AT1G50500.1	3099	828aa	AT1G50500.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S9WKR6 Q0WQF4	-	-
HIT1-203	AT1G50500.4	2984	824aa	AT1G50500.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8ATX5	-	-
HIT1-204	AT1G50500.5	2878	680aa	AT1G50500.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8ATZ0	-	-

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Summary

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