Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
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Ontologies
- GO: Anatomical entity
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ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: UBC22 AT5G05080

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Description

ubiquitin-conjugating enzyme 22 [Source:NCBI gene (formerly Entrezgene);Acc:830390]

Gene Synonyms

ATUBC22, MUG13.6, MUG13_6, ubiquitin-conjugating enzyme 22

Location

Chromosome 5: 1,498,438-1,500,784 reverse strand.

About this gene

This gene has 4 transcripts (splice variants), 231 orthologues and 37 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
UBC22-201	AT5G05080.3	1615	251aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178UL56 Q9FF66	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
UBC22-203	AT5G05080.4	1464	251aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178UL56 Q9FF66	-	-
UBC22-202	AT5G05080.1	1344	251aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178UL56 Q9FF66	-	-
UBC22-204	AT5G05080.2	1193	251aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178UL56 Q9FF66	-	-

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External references

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This gene corresponds to the following database identifiers:

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External database	Database identifier
Expression Atlas	AT5G05080 [view all locations]
KNETMINER_ARA	AT5G05080 [view all locations]
NASC Gene ID	AT5G05080-TAIR-G ubiquitin-conjugating enzyme 22 [view all locations]
NCBI gene (formerly Entrezgene)	UBC22 ubiquitin-conjugating enzyme 22 [view all locations]
TAIR	AT5G05080 ubiquitin-conjugating enzyme 22 [view all locations]
TAIR Gene Name	UBC22 [view all locations]
UniProtKB Gene Name	UBC22 [view all locations]
WikiGene	UBC22 ubiquitin-conjugating enzyme 22 [view all locations]

The following database identifiers correspond to the transcripts of this gene:

Transcript ID
AT5G05080.1
AT5G05080.2
AT5G05080.4
AT5G05080.3

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