Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT5G41380

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Description

CCT motif family protein [Source:NCBI gene (formerly Entrezgene);Acc:834140]

Gene Synonyms

MYC6.9, MYC6_9

Location

Chromosome 5: 16,561,278-16,563,732 reverse strand.

About this gene

This gene has 1 transcript (splice variant), 117 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
AT5G41380-201	AT5G41380.1	1954	307aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5Q0A4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Literature

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Showing the top 7 hits from Europe PubMed Central

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PubMed ID	Title	Authors	Journal
38674527	Genome-Wide Identification of BrCMF Genes in Brassica rapa and Their Expression Analysis under Abiotic Stresses.	Chen L, Wu X, Zhang M, Yang L, Ji Z, Chen R, Cao Y, Huang J, Duan Q.	Plants (Basel) 13 (8) 2024
38137056	Genome-Wide Association Study to Identify Possible Candidate Genes of Snap Bean Leaf and Pod Color.	Celebioglu B, Hart JP, Porch T, Griffiths P, Myers JR.	Genes (Basel) 14 (12) 2023
33562315	The pip1s Quintuple Mutants Demonstrate the Essential Roles of PIP1s in the Plant Growth and Development of Arabidopsis.	Wang X, Wu Y, Liu Z, Liu T, Zheng L, Zhang G.	Int J Mol Sci 22 (4) 2021
31331261	Prediction of regulatory long intergenic non-coding RNAs acting in trans through base-pairing interactions.	Deforges J, Reis RS, Jacquet P, Vuarambon DJ, Poirier Y.	BMC Genomics 20 (1) 2019
28651538	Systematic discovery of novel eukaryotic transcriptional regulators using sequence homology independent prediction.	Bossi F, Fan J, Xiao J, Chandra L, Shen M, Dorone Y, Wagner D, Rhee SY.	BMC Genomics 18 (1) 2017
29220383	Characterization of the CCT family and analysis of gene expression in Aegilops tauschii.	Zheng X, Li X, Ge C, Chang J, Shi M, Chen J, Qiao L, Chang Z, Zheng J, Zhang J.	PLoS One 12 (12) 2017
19956801	AGAMOUS controls GIANT KILLER, a multifunctional chromatin modifier in reproductive organ patterning and differentiation.	Ng KH, Yu H, Ito T.	PLoS Biol 7 (11) 2009

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