Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Transcript: fgenesh2_kg.82251AT5G62560.1

Description

RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:D7MMC1]

Location

About this transcript

This transcript has 3 exons and is annotated with 22 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	fgenesh2_kg.8__2251__AT5G62560.1	1873	561aa	fgenesh2_kg.8__2251__AT5G62560.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D7MMC1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 1,873 bps, Translation length: 561 residues

Version

fgenesh2_kg.8__2251__AT5G62560.1

Type

Protein coding

Annotation Method

Gene annotation by JGI through a process of automatic and manual curation

Frameshift introns

Frameshift introns occur at intron number(s) 2.