Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Transcript: Al_scaffold_0005_2143

Description

ubiquitin E2 variant 1D-4 [Source:Projected from Arabidopsis thaliana (AT3G52560) TAIR;Acc:AT3G52560]

Location

About this transcript

This transcript has 4 exons and is annotated with 8 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	Al_scaffold_0005_2143	444	147aa	Al_scaffold_0005_2143	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D7LU87	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 444 bps, Translation length: 147 residues

Version

Al_scaffold_0005_2143

Type

Protein coding

Annotation Method

Gene annotation by JGI through a process of automatic and manual curation