Transcript: scaffold_702704.1
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Description
Ubiquitin carboxyl-terminal hydrolase [Source:UniProtKB/TrEMBL;Acc:D7MBX6 ]
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- scaffold_702704.1 748 235aa Gene/transcipt that contains an open reading frame (ORF). Protein coding
D7MBX6 - A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.html Ensembl Canonical,
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Codons Alternating codons Alternating codons Exons Variants Other Markup ▼ ▲
1 T GACAGAGAAAAATCAGAAG ATG ACG ACA GTA GAC GAA GGT TAT TCA GCT AAG AAA TGG C 60
....................ATGACGACAGTAGACGAAGGTTATTCAGCTAAGAAATGGC 40
....................-M--T--T--V--D--E--G--Y--S--A--K--K--W-- 13
61 TT CCA CTT GAA GCT AAC CCA GAT GTT ATC AAT CAG T AT CTT TGG GGA CTT GGT CTT TCT C 120
41 TTCCACTTGAAGCTAACCCAGATGTTATCAATCAGTATCTTTGGGGACTTGGTCTTTCTC 100
14 L--P--L--E--A--N--P--D--V--I--N--Q--Y--L--W--G--L--G--L--S-- 33
121 CT GAT GAA GTA GAG TGC AAT GAT GTG TTT GGC TTA GAC GAT GAA CTT CTC GAG ATG GTT C 180
101 CTGATGAAGTAGAGTGCAATGATGTGTTTGGCTTAGACGATGAACTTCTCGAGATGGTTC 160
34 P--D--E--V--E--C--N--D--V--F--G--L--D--D--E--L--L--E--M--V-- 53
181 CA AAG CCT GTT CTT GCT GTT CTC TTT CTT TAC CCA ATC ACC AAA AAG TGT GAA GAA GAG A 240
161 CAAAGCCTGTTCTTGCTGTTCTCTTTCTTTACCCAATCACCAAAAAGTGTGAAGAAGAGA 220
54 P--K--P--V--L--A--V--L--F--L--Y--P--I--T--K--K--C--E--E--E-- 73
241 GA ATC AAG CAA GAC AAA GAA ATT AAG GAA AAG GTA CAT CAG ACT GAC AAA GTC TAC TTC A 300
221 GAATCAAGCAAGACAAAGAAATTAAGGAAAAGGTACATCAGACTGACAAAGTCTACTTCA 280
74 R--I--K--Q--D--K--E--I--K--E--K--V--H--Q--T--D--K--V--Y--F-- 93
301 TG AAA CAA ACT GTG GAT AAT GCT TGT GGA ACC ATT GGG CTC CTT CAT GCT ATT GGG AAT A 360
281 TGAAACAAACTGTGGATAATGCTTGTGGAACCATTGGGCTCCTTCATGCTATTGGGAATA 340
94 M--K--Q--T--V--D--N--A--C--G--T--I--G--L--L--H--A--I--G--N-- 113
361 TA ACC TCT GAG ATC AAA CTC T C C GAG GGA TCG TTC TTG GAT AGA TTC TTC AAA TCC ACT G 420
341 TAACCTCTGAGATCAAACTCTCCGAGGGATCGTTCTTGGATAGATTCTTCAAATCCACTG 400
114 I--T--S--E--I--K--L--S--E--G--S--F--L--D--R--F--F--K--S--T-- 133
421 CC AAT ATG ACT CCT ATA GAG C GT GCA AGG TTT CTT GAG AAT GAC AGT CAA ATA GAA GAT G 480
401 CCAATATGACTCCTATAGAGCGTGCAAGGTTTCTTGAGAATGACAGTCAAATAGAAGATG 460
134 A--N--M--T--P--I--E--R--A--R--F--L--E--N--D--S--Q--I--E--D-- 153
481 CT CAT TCT GTA GCT GTT ATA GCT GGT GAT ACA ACG G CT TCA GAC GAG GTG GAC ACG CAT T 540
461 CTCATTCTGTAGCTGTTATAGCTGGTGATACAACGGCTTCAGACGAGGTGGACACGCATT 520
154 A--H--S--V--A--V--I--A--G--D--T--T--A--S--D--E--V--D--T--H-- 173
541 TC ATC TGT TTA GCT TGT GTA GAT G G T GAG CTC TAT GAA CTT GAT GGA GAT AGG GCA GGA C 600
521 TCATCTGTTTAGCTTGTGTAGATGGTGAGCTCTATGAACTTGATGGAGATAGGGCAGGAC 580
174 F--I--C--L--A--C--V--D--G--E--L--Y--E--L--D--G--D--R--A--G-- 193
601 CA ATT TCA CAT GGT GTT TCC TCT CCA GCT ACT TTG TTG CAG G AC GCA GCA AAA GTG ATA A 660
581 CAATTTCACATGGTGTTTCCTCTCCAGCTACTTTGTTGCAGGACGCAGCAAAAGTGATAA 640
194 P--I--S--H--G--V--S--S--P--A--T--L--L--Q--D--A--A--K--V--I-- 213
661 AG ACG ATA ATC GAG AAG AAT CCG GAT TCT CTC AAC TTC AAT GTG ATA GCC ATC TCT AAG A 720
641 AGACGATAATCGAGAAGAATCCGGATTCTCTCAACTTCAATGTGATAGCCATCTCTAAGA 700
214 K--T--I--I--E--K--N--P--D--S--L--N--F--N--V--I--A--I--S--K-- 233
721 AA GCC TGA GTGACTGTTCTTAAGAAGCA 748
701 AAGCCTGA.................... 708
234 K--A--*-.................... 235
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