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    Arabidopsis lyrata (v.1.0) ▼

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    Transcript: scaffold_603867.1

    Location

    Chromosome 6: 22,943,972-22,947,073 reverse strand.

    About this transcript

    This transcript has 4 exons and is annotated with 28 domains and features.

    Gene

    This transcript is a product of gene scaffold_603867.1 Show transcript tableHide transcript table

    Show/hide columns (1 hidden)
    • Name
    • Transcript ID
    • bp
    • Protein
    • Translation ID
    • Biotype
    • UniProt
    • Flags
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    NameTranscript IDbpProteinBiotypeUniProtFlags
    -scaffold_603867.11876610aa
     
    Protein coding
    		D7M2J8 Ensembl Canonical

    Domains & features

    Domains

    Show/hide columns
    • Domain source
    • Start
    • End
    • Description
    • Accession
    • InterPro
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    Domain sourceStartEndDescriptionAccessionInterPro
    Gene3D353-1.20.1280.50-
    CDD853-cd22164-
    Superfamily98565-SSF52047-
    Gene3D340392-1.20.1280.50-
    PANTHER343589-PTHR38926-
    CDD346392-cd22164-
    PROSITE profiles653F-box domainPS50181IPR001810 [Display all genes with this domain]
    Pfam955F-box domainPF12937IPR001810 [Display all genes with this domain]
    SMART1253F-box domainSM00256IPR001810 [Display all genes with this domain]
    PROSITE profiles344391F-box domainPS50181IPR001810 [Display all genes with this domain]
    Pfam347393F-box domainPF12937IPR001810 [Display all genes with this domain]
    SMART350391F-box domainSM00256IPR001810 [Display all genes with this domain]
    Superfamily959F-box-like domain superfamilySSF81383IPR036047 [Display all genes with this domain]
    Superfamily340397F-box-like domain superfamilySSF81383IPR036047 [Display all genes with this domain]
    Pfam113131Leucine-rich repeatPF13516IPR001611 [Display all genes with this domain]
    Gene3D59271Leucine-rich repeat domain superfamily3.80.10.10IPR032675 [Display all genes with this domain]
    Gene3D417584Leucine-rich repeat domain superfamily3.80.10.10IPR032675 [Display all genes with this domain]
    SMART112137Leucine-rich repeat, cysteine-containing subtypeSM00367IPR006553 [Display all genes with this domain]
    SMART195219Leucine-rich repeat, cysteine-containing subtypeSM00367IPR006553 [Display all genes with this domain]
    SMART220243Leucine-rich repeat, cysteine-containing subtypeSM00367IPR006553 [Display all genes with this domain]
    SMART442467Leucine-rich repeat, cysteine-containing subtypeSM00367IPR006553 [Display all genes with this domain]
    SMART468492Leucine-rich repeat, cysteine-containing subtypeSM00367IPR006553 [Display all genes with this domain]
    SMART526550Leucine-rich repeat, cysteine-containing subtypeSM00367IPR006553 [Display all genes with this domain]
    SMART551574Leucine-rich repeat, cysteine-containing subtypeSM00367IPR006553 [Display all genes with this domain]

    Other features

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    • Feature type
    • Start
    • End
    Download what you seeDownload whole table
    Feature typeStartEnd
    Seg103120
    Seg203215
    Seg278337
    Alphafold1610

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