Arabidopsis lyrata (v.1.0) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationVariant tableVariant imagePopulation comparisonComparison imageExternal ReferencesGeneral identifiersOligo probesSupporting evidenceID HistoryTranscript historyProtein history.
Chromosome 3: 7,554,293-7,555,115 forward strand.
This transcript has 1 exon and is annotated with 12 domains and features.
This transcript is a product of gene scaffold_302088.1 Show transcript tableHide transcript table
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| Domain source | Start | End | Description | Accession | InterPro |
|---|---|---|---|---|---|
| Gene3D | 2 | 123 | - | 1.20.1280.50 | - |
| CDD | 6 | 42 | - | cd22157 | - |
| PANTHER | 6 | 239 | Arabidopsis thaliana F-box | PTHR47993 | IPR050233 [Display all genes with this domain] |
| PROSITE patterns | 67 | 79 | EF-Hand 1, calcium-binding site | PS00018 | IPR018247 [Display all genes with this domain] |
| Pfam | 196 | 237 | F-box associated domain, type 1 | PF07734 | IPR006527 [Display all genes with this domain] |
| NCBIFAM | 97 | 239 | F-box associated interaction domain | TIGR01640 | IPR017451 [Display all genes with this domain] |
| TIGRFAM | 97 | 239 | F-box associated interaction domain | TIGR01640 | IPR017451 [Display all genes with this domain] |
| PROSITE profiles | 1 | 46 | F-box domain | PS50181 | IPR001810 [Display all genes with this domain] |
| Pfam | 5 | 44 | F-box domain | PF00646 | IPR001810 [Display all genes with this domain] |
| SMART | 6 | 46 | F-box domain | SM00256 | IPR001810 [Display all genes with this domain] |
| Superfamily | 5 | 64 | F-box-like domain superfamily | SSF81383 | IPR036047 [Display all genes with this domain] |
| Feature type | Start | End |
|---|---|---|
| Alphafold | 1 | 260 |
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Ensembl Plants release 60 - October 2024 © EMBL-EBI EMBL-EBI
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