Arabidopsis lyrata (v.1.0)
Description

RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:D7MEU7]

Location
About this gene

This gene has 1 transcript (splice variant), 53 orthologues and 53 paralogues.

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  • Name
  • Transcript ID
  • bp
  • Protein
  • Translation ID
  • Biotype
  • UniProt
  • RefSeq
  • Flags
NameTranscript IDbpProteinBiotypeUniProtRefSeqFlags
-scaffold_702287.11165374aa
 
Protein coding
D7MEU7 -Ensembl Canonical

Info

This gene family has significant gene gain or loss events (p-value for the gene family is 0, as computed by CAFE). Click the tree nodes or the icons on the image blue bar to interact with the tree.

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000Chondrus crispus00Galdieria sulphuraria0Cyanidioschyzon merolae00Chlamydomonas reinhardtii0Ostreococcus lucimarinus0000Human0C.savignyi00Caenorhabditis elegans (Nematode, N2)0Drosophila melanogaster (Fruit fly) - GCA_000001215.4 [FlyBase annotation]0Saccharomyces cerevisiae110Marchantia polymorpha0Physcomitrium patens247Papaver somniferum4Amborella trichopoda4Nymphaea colorata45Ananas comosus2Asparagus officinalis555Eragrostis curvula6Eragrostis tef33Setaria italica3Setaria viridis6Echinochloa crus-galli33Sorghum bicolor6Zea mays34Saccharum spontaneum (component C)1Saccharum spontaneum (component B)3Saccharum spontaneum (component D)1Saccharum spontaneum (component A)4Digitaria exilis4Panicum hallii HAL213Musa acuminata33712Avena sativa Sang7Avena sativa OT30983Lolium perenne3Secale cereale3Brachypodium distachyon3Hordeum vulgare33Aegilops umbellulata00Triticum aestivum (component U)0Triticum turgidum (component U)33Triticum aestivum (component B)3Triticum turgidum (component B)3Triticum timopheevii (component B)3Triticum spelta (component B)3Triticum dicoccoides (component B)32Triticum aestivum (component A)2Triticum turgidum (component A)3Triticum timopheevii (component A)2Triticum urartu3Triticum spelta (component A)3Triticum dicoccoides (component A)3Triticum aestivum (component D)3Triticum spelta (component D)3Aegilops tauschii333Oryza longistaminata3Oryza rufipogon3Oryza brachyantha3Oryza nivara3Oryza punctata2Oryza glaberrima3Oryza sativa Indica Group6Oryza sativa Japonica Group2Oryza glumipatula3Oryza meridionalis2Oryza barthii4Leersia perrieri4Dioscorea rotundata54Kalanchoe fedtschenkoi554Capsicum annuum66Solanum lycopersicum7Solanum tuberosum6Nicotiana attenuata8Sesamum indicum63Helianthus annuus7Lactuca sativa3Cynara cardunculus7Ipomoea triloba5Coffea canephora4Daucus carota99Fraxinus excelsior14Olea europaea9Actinidia chinensis56Vitis vinifera546Corylus avellana5Juglans regia6Quercus suber3Quercus lobata810Populus trichocarpa8Manihot esculenta43Cannabis sativa female5Ficus carica4Rosa chinensis410Malus domestica Golden44Prunus dulcis4Prunus persica4Prunus avium44Citrullus lanatus4Cucumis melo5Cucumis sativus610Arachis hypogaea6Lupinus angustifolius66Cajanus cajan (pigeon pea) - GCA_000340665.15Phaseolus vulgaris44Vigna angularis4Vigna radiata4Vigna unguiculata5Sphenostylis stenocarpa1313Glycine max14Glycine soja (Wild soybean)67Medicago truncatula6Trifolium pratense65Lathyrus sativus8Pisum sativum6Vicia faba554Theobroma cacao Matina 1-68Gossypium raimondii4Corchorus capsularis677Arabidopsis thaliana7Arabidopsis halleri7Arabidopsis lyrata919Brassica juncea19Brassica napus10Brassica oleracea6Brassica rapa R-o-185Arabis alpina5Eutrema salsugineum66Camelina sativa (component G1)5Camelina sativa (component G3)6Camelina sativa (component G2)6Pistacia vera4Citrus clementina55Eucalyptus grandis4Corymbia citriodora55Beta vulgaris8Chenopodium quinoa1Selaginella moellendorffii1Chara braunii
LEGENDNo significant changeSignificant ExpansionSignificant ContractionNNumber of MembersNodes with 0 membersNumber of members119SpeciesSpecies with no genesSpeciesQueried species