Arabidopsis halleri (Ahal2.2) ▼ 
Summary
SequenceProtein InformationProtein summaryDomains & featuresVariantsPDB 3D protein modelAlphaFold predicted modelGenetic VariationVariant tableVariant imagePopulation comparisonComparison imageExternal ReferencesSupporting evidenceID HistoryTranscript historyProtein history.
SuperContig FJVB01000116.1: 257,407-265,527 forward strand.
This transcript has 11 exons, is annotated with 48 domains and features and maps to 5 oligo probes.
This transcript is a product of gene g22694 Show transcript tableHide transcript table
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| Domain source | Start | End | Description | Accession | InterPro |
|---|---|---|---|---|---|
| Gene3D | 12 | 86 | - | 3.30.70.100 | - |
| CDD | 100 | 701 | - | cd02079 | - |
| NCBIFAM | 150 | 704 | - | TIGR01512 | - |
| TIGRFAM | 150 | 704 | - | TIGR01512 | - |
| Gene3D | 187 | 302 | - | 2.70.150.10 | - |
| Prints | 190 | 208 | - | PR00943 | - |
| Pfam | 209 | 378 | - | PF00122 | - |
| Prints | 248 | 262 | - | PR00119 | - |
| SFLD | 381 | 651 | - | SFLDS00003 | - |
| Pfam | 395 | 613 | - | PF00702 | - |
| Prints | 399 | 413 | - | PR00119 | - |
| Prints | 545 | 555 | - | PR00119 | - |
| Prints | 577 | 594 | - | PR00943 | - |
| Prints | 599 | 618 | - | PR00119 | - |
| Prints | 623 | 635 | - | PR00119 | - |
| Prints | 634 | 648 | - | PR00943 | - |
| PANTHER | 14 | 900 | Cation Transport ATPase Type IB | PTHR48085 | IPR051014 [Display all genes with this domain] |
| Gene3D | 392 | 650 | HAD superfamily | 3.40.50.1000 | IPR023214 [Display all genes with this domain] |
| Superfamily | 399 | 700 | HAD-like superfamily | SSF56784 | IPR036412 [Display all genes with this domain] |
| Superfamily | 15 | 83 | Heavy metal-associated domain superfamily | SSF55008 | IPR036163 [Display all genes with this domain] |
| PROSITE profiles | 17 | 83 | Heavy metal-associated domain, HMA | PS50846 | IPR006121 [Display all genes with this domain] |
| NCBIFAM | 174 | 677 | P-type ATPase | TIGR01494 | IPR001757 [Display all genes with this domain] |
| TIGRFAM | 174 | 677 | P-type ATPase | TIGR01494 | IPR001757 [Display all genes with this domain] |
| Superfamily | 212 | 298 | P-type ATPase, A domain superfamily | SSF81653 | IPR008250 [Display all genes with this domain] |
| Gene3D | 410 | 531 | P-type ATPase, cytoplasmic domain N | 3.40.1110.10 | IPR023299 [Display all genes with this domain] |
| SFLD | 381 | 651 | P-type ATPase, haloacid dehalogenase domain | SFLDF00027 | IPR044492 [Display all genes with this domain] |
| PROSITE patterns | 401 | 407 | P-type ATPase, phosphorylation site | PS00154 | IPR018303 [Display all genes with this domain] |
| NCBIFAM | 150 | 702 | P-type ATPase, subfamily IB | TIGR01525 | IPR027256 [Display all genes with this domain] |
| TIGRFAM | 150 | 702 | P-type ATPase, subfamily IB | TIGR01525 | IPR027256 [Display all genes with this domain] |
| Superfamily | 150 | 393 | P-type ATPase, transmembrane domain superfamily | SSF81665 | IPR023298 [Display all genes with this domain] |
| Feature type | Start | End |
|---|---|---|
| Seg | 6 | 15 |
| Seg | 100 | 118 |
| Seg | 143 | 163 |
| Seg | 210 | 231 |
| Seg | 322 | 336 |
| Seg | 418 | 429 |
| Seg | 453 | 464 |
| Seg | 506 | 518 |
| Seg | 649 | 654 |
| Seg | 1009 | 1020 |
| Seg | 1119 | 1131 |
| Seg | 1149 | 1159 |
| TMHMM | 100 | 117 |
| TMHMM | 122 | 141 |
| TMHMM | 315 | 337 |
| TMHMM | 352 | 374 |
| TMHMM | 656 | 675 |
| TMHMM | 680 | 702 |
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Ensembl Plants release 60 - October 2024 © EMBL-EBI EMBL-EBI
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