Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AET5Gv20498700

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Description

Cleavage and polyadenylation specificity factor subunit 3-II [Source:Projected from Arabidopsis thaliana (AT2G01730) UniProtKB/Swiss-Prot;Acc:Q8GUU3]

Location

Chromosome 5D: 326,258,643-326,264,030 reverse strand.

About this gene

This gene has 11 transcripts (splice variants), 153 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	AET5Gv20498700.2	2187	552aa	AET5Gv20498700.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A453KSF6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	AET5Gv20498700.4	1906	524aa	AET5Gv20498700.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A453KSF9	-
-	AET5Gv20498700.3	1753	388aa	AET5Gv20498700.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A453KSF3	-
-	AET5Gv20498700.7	1249	227aa	AET5Gv20498700.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A453KSG1	-
-	AET5Gv20498700.5	1165	292aa	AET5Gv20498700.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A453KSG2	-
-	AET5Gv20498700.8	1074	357aa	AET5Gv20498700.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A453KSF8	-
-	AET5Gv20498700.1	797	209aa	AET5Gv20498700.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A453KSF4	-
-	AET5Gv20498700.10	667	222aa	AET5Gv20498700.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A453KSF7	-
-	AET5Gv20498700.6	652	200aa	AET5Gv20498700.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A453KSG6	-
-	AET5Gv20498700.11	450	81aa	AET5Gv20498700.11	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A453KSG0	-
-	AET5Gv20498700.9	398	132aa	AET5Gv20498700.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A453KSG4	-

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Cultivars

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data