Selaginella moellendorffii Assembly and Gene Annotation
About Selaginella moellendorffii
Selaginella moellendorffii is a spikemoss. They belong to the subdivision of higher vascular plants called lycophytes, an ancient group of plants appeared around 410 million years ago. Selaginella moellendorffii is the first non-seeded plant genome reported, making it a key species for plant evolution studies.
Assembly
The Selaginella moellendorffii genome was sequenced by JGI. The nuclear genome size is only ~100 Mb.
Annotation
The genome annotation for Selaginella moellendorffii has been derived from annotation submitted to the INSDC; and enhanced by importing data from additional sources, principally UniProtKB and GOA.
References
- The Selaginella genome identifies genetic changes associated with
the evolution of vascular
plants.
Banks JA, Nishiyama T, Hasebe M, Bowman JL, Gribskov M, dePamphilis C, Albert VA, Aono N, Aoyama T, Ambrose BA et al. 2011. Science. 332:960-963.
Picture credit: Emmanuel Boutet
More information
General information about this species can be found in Wikipedia.
Statistics
Summary
Assembly | v1.0, INSDC Assembly GCA_000143415.1, Jul 2010 |
Database version | 112.1 |
Golden Path Length | 212,645,483 |
Genebuild by | JGI |
Genebuild method | Import |
Data source | Joint Genome Institute |
Gene counts
Coding genes | 34,799 |
Non coding genes | 1,221 |
Small non coding genes | 1,212 |
Long non coding genes | 9 |
Pseudogenes | 66 |
Gene transcripts | 36,112 |