Marchantia polymorpha (MpTak1_v7.1)

Marchantia polymorpha Assembly and Gene Annotation

About Marchantia polymorpha subsp. ruderalis

Marchantia polymorpha is a species of large thalloid liverwort in the class Marchantiopsida. M. polymorpha is highly variable in appearance and contains several subspecies. This species is dioicous, having separate male and female plants. M. polymorpha has a wide distribution and is found worldwide. Common names include common liverwort or umbrella liverwort.

Assembly

The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_039105155.1].

The total length of the assembly is 248042680 bp contained within 10 scaffolds. The scaffold N50 value is 31378154, the scaffold L50 value is 4. The GC% content of the assembly is 43.5%.

Annotation

The annotation presented is derived from genes imported from the community GFF3 with the assembly accession GCA_039105155.1.

Genomic annotation was deposited along with initial assembly submission by "National Institute of Genetics".

Protein features, BLAST hits and cross-references have been computed by Ensembl Plants.

References

  1. https://marchantia.info/

Picture credit: Creative Commons Zero Public Domain Dedication via Wikimedia Commons (Image source)

Statistics

Summary

AssemblyMpTak1_v7.1, INSDC Assembly GCA_039105155.1,
Database version113.2
Golden Path Length248,042,680
Genebuild byNIG
Genebuild methodImport
Data sourceNIG

Gene counts

Coding genes18,004
Non coding genes259
Small non coding genes259
Gene transcripts22,819