Coffea canephora (AUK_PRJEB4211_v1)

About Coffea canephora

Coffea canephora, commonly known as robusta coffee, is a species of coffee in the Rubiaceae family. Within its genus, C. canephora has the widest natural distribution which extends west to east from Guinea to Uganda, and north to south from Cameroon to Angola. It is an allogamous diploid flowering plant (2n=2x=22). This reference genome results from a collaboration between Genoscope, IRD and Cirad (UMRs AGAP, DIADE and RPB), funded by ANR, and the Coffee Genome Sequencing Consortium.

Taxonomy ID 49390

Data source Genoscope CEA

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Genome assembly: AUK_PRJEB4211_v1

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Download DNA sequence (FASTA)

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Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

More about this genebuild

Download genes, cDNAs, ncRNA, proteins - FASTA - GFF3

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Comparative genomics

What can I find? Homologues, gene trees, and whole genome alignments across multiple species.

More about comparative analyses

Phylogenetic overview of gene families

Download alignments (EMF)


This species currently has no variation database. However you can process your own variants using the Variant Effect Predictor:

Variant Effect Predictor

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