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Wheat genomics resources are developed as part of our involvement in the consortium Triticeae Genomics For Sustainable Agriculture, funded by the BBSRC, and led by TGAC.
About Aegilops tauschii
Aegilops tauschii (goatgrass) is the diploid progenitor of the bread wheat D-genome, providing important evolutionary information for wheat. The bread wheat genome is a hexaploid, resulting from the hybridization of the wild A. tauschii with a cultivated tetraploid wheat, Triticum turgidum. This spontaneous event occured about 8,000 years ago in the Fertile Crescent.
Taxonomy ID 37682
Data source BGI
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Comparative genomics
What can I find? Homologues, gene trees, and whole genome alignments across multiple species.
More about comparative analyses
Phylogenetic overview of gene families
Download alignments (EMF)
Genomic alignments [2]
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Variation
This species currently has no variation database. However you can process your own variants using the Variant Effect Predictor:
Regulation
What can I find? Microarray annotations.
More about regulation in Aegilops tauschii
More about the Ensembl Plants microarray annotation strategy
Links
Links (Aegilops tauschii)
- GigaDB
- ENA study: SRP002455: Discovery of SNPs and genome-specific mutations by comparative analysis of transcriptomes of hexaploid wheat and its diploid ancestors
- ENA study: DRP000562: RNASeq from seedling leaves of Aegilops tauschii
- TREP, the Triticeae Repeat Sequence Database
Links (Triticum aestivum)
- MIPS Wheat Genome Database
- ENA study ERP000319: 454 pyrosequencing of the Triticum aestivum (bread wheat) genome to 5X coverage
- Triticum aestivum UniGene cluster sequences at NCBI
- Triticum aestivum ESTs at ENA
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