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About Oryza sativa Japonica
Oryza sativa Japonica (rice) is the staple food for 2.5 billion people. It is the grain with the second highest worldwide production after Zea mays. In addition to its agronomic importance, rice is an important model species for monocot plants and cereals such as maize, wheat, barley and sorghum. O. sativa has a compact diploid genome of approximately 500 Mbp (n=12) compared with the multi-gigabase genomes of maize, wheat and barley.
Taxonomy ID 39947
Data source RAP-DB
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Comparative genomics
What can I find? Homologues, gene trees, and whole genome alignments across multiple species.
More about comparative analyses
Phylogenetic overview of gene families
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Genomic alignments [44]
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Syntenies [12]
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Variation
What can I find? Short sequence variants and longer structural variants.
More about variation in Oryza sativa Japonica Group
Regulation
What can I find? Microarray annotations.
More about regulation in Oryza sativa Japonica Group
More about the Ensembl Plants microarray annotation strategy
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