About Arabidopsis halleri
The self-incompatible species Arabidopsis halleri is a close relative of the self-compatible model plant Arabidopsis thaliana. The broad European and Asian distribution and heavy metal hyperaccumulation ability make A. halleri a useful model for ecological genomics studies. The sequenced individual, A. halleri ssp. gemmifera Tada mine genotype (W302), was collected from a site with high contamination by heavy metals in Japan.
Taxonomy ID 63677
Data source University of Zurich
Genome assembly: Ahal2.2
More information and statistics
Download DNA sequence (FASTA)
What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.
Download genes, cDNAs, ncRNA, proteins - FASTA - GFF3
What can I find? Homologues, gene trees, and whole genome alignments across multiple species.
More about comparative analyses
Phylogenetic overview of gene families
Download alignments (EMF)
This species currently has no variation database. However you can process your own variants using the Variant Effect Predictor:
What can I find? Microarray annotations.
More about the Ensembl Plants microarray annotation strategy