Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: TRIDC1BG022160

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Description

Similar to MADS box protein [Source: Projected from Oryza sativa (Os05g0203800)]

Location

Chromosome 1B: 192,778,858-192,787,968 reverse strand.

About this gene

This gene has 8 transcripts (splice variants), 280 orthologues and 49 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	Flags
-	TRIDC1BG022160.3	1308	317aa	TRIDC1BG022160.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	TRIDC1BG022160.2	1236	269aa	TRIDC1BG022160.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	TRIDC1BG022160.1	1184	303aa	TRIDC1BG022160.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	TRIDC1BG022160.4	1040	276aa	TRIDC1BG022160.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	TRIDC1BG022160.5	806	268aa	TRIDC1BG022160.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	TRIDC1BG022160.6	662	220aa	TRIDC1BG022160.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	TRIDC1BG022160.7	620	206aa	TRIDC1BG022160.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
-	TRIDC1BG022160.8	444	116aa	TRIDC1BG022160.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data