Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: PRP40B AT3G19670

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Description

pre-mRNA-processing protein 40B [Source:NCBI gene (formerly Entrezgene);Acc:821504]

Gene Synonyms

ATPRP40B, pre-mRNA-processing protein 40B

Location

Chromosome 3: 6,827,986-6,837,505 reverse strand.

About this gene

This gene has 4 transcripts (splice variants), 186 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
PRP40B-202	AT3G19670.2	3581	992aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4JCC1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
PRP40B-203	AT3G19670.4	3478	973aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LM87	-	-
PRP40B-201	AT3G19670.3	3409	992aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4JCC1	-	-
PRP40B-204	AT3G19670.1	3165	992aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4JCC1	-	-

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Variant table

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