Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT5G54130

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Description

Calcium-binding endonuclease/exonuclease/phosphatase family [Source:NCBI gene (formerly Entrezgene);Acc:835500]

Location

Chromosome 5: 21,962,570-21,965,623 forward strand.

About this gene

This gene has 3 transcripts (splice variants), 175 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT5G54130-201	AT5G54130.2	1985	436aa	AT5G54130.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178UA85 Q8GUH8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT5G54130-202	AT5G54130.4	1838	351aa	AT5G54130.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4JYU5	-	-
AT5G54130-203	AT5G54130.3	1832	349aa	AT5G54130.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B3H5H6	-	-

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Summary

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