Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: HCF109 AT5G36170

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Description

high chlorophyll fluorescent 109 [Source:NCBI gene (formerly Entrezgene);Acc:833614]

Gene Synonyms

ATPRFB, high chlorophyll fluorescent 109, MAB16.12, MAB16_12, PEPTIDE RELEASE FACTOR 2

Location

Chromosome 5: 14,235,835-14,238,072 reverse strand.

About this gene

This gene has 4 transcripts (splice variants), 157 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
HCF109-201	AT5G36170.1	1717	456aa	AT5G36170.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178UGY5 Q9LVY0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
HCF109-202	AT5G36170.3	1695	391aa	AT5G36170.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4K2X9	-	-
HCF109-204	AT5G36170.4	1646	390aa	AT5G36170.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BGW0	-	-
HCF109-203	AT5G36170.2	1627	455aa	AT5G36170.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178UH07	-	-

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Summary

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