Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Gene: AT5G18420

.

Description

CCR4-NOT transcription complex subunit [Source:NCBI gene (formerly Entrezgene);Acc:831960]

Gene Synonyms

F20L16.140, F20L16_140

Location

Chromosome 5: 6,105,283-6,109,501 reverse strand.

About this gene

This gene has 4 transcripts (splice variants) and 233 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT5G18420-202	AT5G18420.2	1532	442aa	AT5G18420.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B4F7N8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT5G18420-201	AT5G18420.1	1845	441aa	AT5G18420.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B4F7Q4	-	-
AT5G18420-204	AT5G18420.4	1491	349aa	AT5G18420.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8BG97	-	-
AT5G18420-203	AT5G18420.3	1477	439aa	AT5G18420.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4JWN4	-	-

.

Summary

.

.