Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: LDL3 AT4G16310

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Description

LSD1-like 3 [Source:NCBI gene (formerly Entrezgene);Acc:827325]

Gene Synonyms

DL4185W, FCAALL.342, LSD1-like 3

Location

Chromosome 4: 9,217,988-9,226,280 forward strand.

About this gene

This gene has 5 transcripts (splice variants), 171 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
LDL3-204	AT4G16310.4	6334	1628aa	AT4G16310.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654FPU5 F4JLS1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
LDL3-202	AT4G16310.2	6228	1628aa	AT4G16310.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654FPU5 F4JLS1	-	-
LDL3-201	AT4G16310.3	6216	1628aa	AT4G16310.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654FPU5 F4JLS1	-	-
LDL3-203	AT4G16310.1	5931	1628aa	AT4G16310.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654FPU5 F4JLS1	-	-
LDL3-205	AT4G16310.5	5387	1628aa	AT4G16310.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654FPU5 F4JLS1	-	-

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Summary

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