Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT3G54500

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Description

agglutinin-like protein [Source:NCBI gene (formerly Entrezgene);Acc:824615]

Gene Synonyms

LNK2, night light-inducible and clock-regulated 2

Location

Chromosome 3: 20,175,370-20,179,070 reverse strand.

About this gene

This gene has 8 transcripts (splice variants) and 98 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT3G54500-204	AT3G54500.3	2333	680aa	AT3G54500.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2H1ZEL2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT3G54500-205	AT3G54500.2	2522	453aa	AT3G54500.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2H1ZEK6	-	-
AT3G54500-201	AT3G54500.4	2452	663aa	AT3G54500.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4JCX9	-	-
AT3G54500-202	AT3G54500.1	2330	648aa	AT3G54500.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7G2ESR7	-	-
AT3G54500-208	AT3G54500.5	2283	649aa	AT3G54500.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S9XLJ2	-	-
AT3G54500-206	AT3G54500.6	2246	569aa	AT3G54500.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
AT3G54500-207	AT3G54500.7	2147	649aa	AT3G54500.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S9XLJ2	-	-
AT3G54500-203	AT3G54500.8	2067	569aa	AT3G54500.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

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Summary

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