Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT3G53270

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Description

Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein [Source:NCBI gene (formerly Entrezgene);Acc:824494]

Location

Chromosome 3: 19,750,047-19,753,280 reverse strand.

About this gene

This gene has 9 transcripts (splice variants) and 145 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT3G53270-207	AT3G53270.8	1985	280aa	AT3G53270.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384LN59 Q8RXK3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT3G53270-208	AT3G53270.9	1825	280aa	AT3G53270.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384LN59 Q8RXK3	-	-
AT3G53270-204	AT3G53270.4	1753	280aa	AT3G53270.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384LN59 Q8RXK3	-	-
AT3G53270-202	AT3G53270.2	1664	280aa	AT3G53270.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384LN59 Q8RXK3	-	-
AT3G53270-203	AT3G53270.3	1650	280aa	AT3G53270.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384LN59 Q8RXK3	-	-
AT3G53270-201	AT3G53270.1	1473	280aa	AT3G53270.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384LN59 Q8RXK3	-	-
AT3G53270-205	AT3G53270.5	1449	280aa	AT3G53270.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384LN59 Q8RXK3	-	-
AT3G53270-206	AT3G53270.7	1343	280aa	AT3G53270.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384LN59 Q8RXK3	-	-
AT3G53270-209	AT3G53270.6	1341	278aa	AT3G53270.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4J9B1	-	-

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Summary

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