Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT1G53380

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Gene Synonyms

F12M16.27, F12M16_27

Location

Chromosome 1: 19,912,990-19,916,686 reverse strand.

About this gene

This gene has 5 transcripts (splice variants), 234 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT1G53380-205	AT1G53380.2	2562	453aa	AT1G53380.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384LFU7 Q9MAG4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT1G53380-201	AT1G53380.1	2137	453aa	AT1G53380.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384LFU7 Q9MAG4	-	-
AT1G53380-202	AT1G53380.3	1987	453aa	AT1G53380.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384LFU7 Q9MAG4	-	-
AT1G53380-204	AT1G53380.5	1976	453aa	AT1G53380.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384LFU7 Q9MAG4	-	-
AT1G53380-203	AT1G53380.4	1917	453aa	AT1G53380.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384LFU7 Q9MAG4	-	-

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Summary

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