Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: SCL5 AT1G50600

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Description

scarecrow-like 5 [Source:NCBI gene (formerly Entrezgene);Acc:841482]

Gene Synonyms

F11F12.8, F11F12_8, scarecrow-like 5

Location

Chromosome 1: 18,737,063-18,739,649 reverse strand.

About this gene

This gene has 3 transcripts (splice variants), 193 orthologues and 33 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
SCL5-201	AT1G50600.2	2231	601aa	AT1G50600.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AW90	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
SCL5-202	AT1G50600.1	2061	597aa	AT1G50600.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8H125	-	-
SCL5-203	AT1G50600.3	2020	526aa	AT1G50600.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AW83	-	-

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Summary

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