Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT1G42480

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Description

TLR4 regulator/MIR-interacting MSAP protein [Source:NCBI gene (formerly Entrezgene);Acc:840852]

Gene Synonyms

T8D8.4, T8D8_4

Location

Chromosome 1: 15,936,156-15,938,974 forward strand.

About this gene

This gene has 3 transcripts (splice variants) and 120 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT1G42480-201	AT1G42480.1	972	182aa	AT1G42480.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654EFS9 Q680L3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT1G42480-202	AT1G42480.2	815	145aa	AT1G42480.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B3H661	-	-
AT1G42480-203	AT1G42480.3	787	182aa	AT1G42480.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4I9G7	-	-

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Summary

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