Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT4G13040

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Description

Integrase-type DNA-binding superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:826918]

Gene Synonyms

F25G13.130, F25G13_130

Location

Chromosome 4: 7,613,213-7,615,955 forward strand.

About this gene

This gene has 8 transcripts (splice variants), 165 orthologues and 18 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT4G13040-208	AT4G13040.3	1386	246aa	AT4G13040.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4JS76	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT4G13040-204	AT4G13040.5	1566	167aa	AT4G13040.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8B748	-	-
AT4G13040-201	AT4G13040.1	1495	226aa	AT4G13040.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654FNP6 Q56XP9	-	-
AT4G13040-203	AT4G13040.2	1493	170aa	AT4G13040.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
AT4G13040-202	AT4G13040.4	1424	196aa	AT4G13040.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8B752	-	-
AT4G13040-205	AT4G13040.6	1422	170aa	AT4G13040.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
AT4G13040-206	AT4G13040.7	1383	223aa	AT4G13040.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8B764	-	-
AT4G13040-207	AT4G13040.8	1364	196aa	AT4G13040.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8B752	-	-

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Summary

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