Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: HCF107 AT3G17040

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Description

high chlorophyll fluorescent 107 [Source:NCBI gene (formerly Entrezgene);Acc:820961]

Gene Synonyms

high chlorophyll fluorescent 107

Location

Chromosome 3: 5,808,666-5,812,780 reverse strand.

About this gene

This gene has 4 transcripts (splice variants), 142 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
HCF107-204	AT3G17040.1	2246	652aa	AT3G17040.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8RWG2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
HCF107-201	AT3G17040.3	3041	457aa	AT3G17040.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LTR5	-	-
HCF107-202	AT3G17040.4	2153	437aa	AT3G17040.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LTR4	-	-
HCF107-203	AT3G17040.2	2054	618aa	AT3G17040.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4J3Z3	-	-

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Summary

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