Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT3G09540

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Description

Pectin lyase-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:820111]

Location

Chromosome 3: 2,928,752-2,931,362 reverse strand.

About this gene

This gene has 3 transcripts (splice variants), 187 orthologues and 25 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT3G09540-201	AT3G09540.1	1689	378aa	AT3G09540.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654FG30 Q9SF49	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT3G09540-202	AT3G09540.2	1679	284aa	AT3G09540.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LQU1	-	-
AT3G09540-203	AT3G09540.3	1619	374aa	AT3G09540.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LQU2	-	-

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Summary

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