Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Export data

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Gene: AT1G52100

.

Description

Mannose-binding lectin superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:841640]

Gene Synonyms

F5F19.16, F5F19_16

Location

Chromosome 1: 19,383,078-19,385,602 reverse strand.

About this gene

This gene has 5 transcripts (splice variants), 96 orthologues and 56 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
AT1G52100-203	AT1G52100.1	1554	437aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT1G52100-202	AT1G52100.4	2051	368aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AWF8	-	-
AT1G52100-205	AT1G52100.5	1866	381aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AWL3	-	-
AT1G52100-204	AT1G52100.2	1857	381aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AWL3	-	-
AT1G52100-201	AT1G52100.3	1834	368aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AWF8	-	-

.

Genomic alignments

.

Alignment: Go

No alignment specified

Please select the alignment you wish to display from the above.

.