Statistics on protein trees
The protein tree pipeline is described at the following page.
This page provides a summary of the Ensembl phylogenetic analysis of protein families. The following views are available:- Overview
- Gene tree coverage and Gene QC for each species
- Size of gene trees (split by their root taxon)
- Gene tree nodes, and the inference of speciation / duplication events
Size of the trees (per root node)
Species | # Trees | % Trees | # Genes | % Genes | Min # genes | Max # genes | Average # genes | Min # species | Max # species | Average # species | Average # genes per species |
---|---|---|---|---|---|---|---|---|---|---|---|
Eukaryotes (Eukaryota) | 4675 | 1974048 | 2 | 61651 | 422.3 | 2 | 127 | 80.7 | 2.2 | ||
Red algae (Rhodophyta) | 419 | 1143 | 2 | 15 | 2.7 | 2 | 3 | 2.4 | 1.1 | ||
Red algae (Rhodophyta) | 108 | 271 | 2 | 14 | 2.5 | 2 | 2 | 2.0 | 1.3 | ||
Galdieria sulphuraria (Galdieria sulphuraria strain 074W) | 156 | 674 | 2 | 48 | 4.3 | 1 | 1 | 1.0 | 4.3 | ||
Chondrus crispus (Chondrus crispus strain Stackhouse) | 354 | 1431 | 2 | 30 | 4.0 | 1 | 1 | 1.0 | 4.0 | ||
Cyanidioschyzon merolae (Cyanidioschyzon merolae strain 10D) | 54 | 135 | 2 | 11 | 2.5 | 1 | 1 | 1.0 | 2.5 | ||
Eukaryotes (Eukaryota) | 2684 | 456113 | 2 | 14016 | 169.9 | 2 | 122 | 45.1 | 1.8 | ||
Green plants (Viridiplantae) | 1548 | 363053 | 2 | 11124 | 234.5 | 2 | 119 | 65.1 | 2.1 | ||
Charophyte/embryophyte group (Streptophytina) | 1585 | 477991 | 2 | 23739 | 301.6 | 2 | 117 | 65.7 | 2.6 | ||
Land plants (Embryophyta) | 1644 | 638238 | 2 | 10555 | 388.2 | 2 | 116 | 47.0 | 4.3 | ||
Land plants (Embryophyta) | 2607 | 571029 | 2 | 7483 | 219.0 | 2 | 114 | 64.8 | 2.5 | ||
Land plants (Embryophyta) | 247 | 1336 | 2 | 41 | 5.4 | 2 | 3 | 2.4 | 2.2 | ||
Land plants (Embryophyta) | 241 | 902 | 2 | 35 | 3.7 | 2 | 2 | 2.0 | 1.9 | ||
Marchantia polymorpha (Marchantia polymorpha strain Tak-1) | 359 | 1428 | 2 | 45 | 4.0 | 1 | 1 | 1.0 | 4.0 | ||
Physcomitrium patens (Physcomitrium patens strain Gransden 2004) | 1007 | 3250 | 2 | 45 | 3.2 | 1 | 1 | 1.0 | 3.2 | ||
Selaginella moellendorffii (Selaginella moellendorffii) | 1551 | 6337 | 2 | 57 | 4.1 | 1 | 1 | 1.0 | 4.1 | ||
Flowering plants (Magnoliopsida) | 4484 | 501491 | 2 | 5453 | 111.8 | 2 | 111 | 44.3 | 1.9 | ||
Mesangiospermae | 9032 | 152461 | 2 | 1568 | 16.9 | 2 | 108 | 9.1 | 1.4 | ||
Mesangiospermae | 787 | 18684 | 2 | 852 | 23.7 | 2 | 64 | 12.3 | 1.6 | ||
Papaver somniferum (Papaver somniferum strain High Noscapine 1 (HN1)) | 1218 | 3895 | 2 | 31 | 3.2 | 1 | 1 | 1.0 | 3.2 | ||
Pentapetalae | 6292 | 71847 | 2 | 1935 | 11.4 | 2 | 64 | 6.5 | 1.5 | ||
Pentapetalae | 124 | 756 | 2 | 42 | 6.1 | 2 | 13 | 3.3 | 1.8 | ||
Chenopodiaceae | 464 | 3033 | 2 | 57 | 6.5 | 2 | 2 | 2.0 | 3.3 | ||
Beta vulgaris (Beta vulgaris subsp. vulgaris strain KWS2320 DH) | 267 | 881 | 2 | 36 | 3.3 | 1 | 1 | 1.0 | 3.3 | ||
Chenopodium quinoa (Chenopodium quinoa strain PI614886) | 317 | 1695 | 2 | 50 | 5.3 | 1 | 1 | 1.0 | 5.3 | ||
Asteridae (asterids) | 120 | 907 | 2 | 28 | 7.6 | 2 | 14 | 4.6 | 1.6 | ||
Asteridae (asterids) | 444 | 2090 | 2 | 36 | 4.7 | 2 | 13 | 3.0 | 1.5 | ||
campanulids | 45 | 228 | 2 | 37 | 5.1 | 2 | 4 | 2.5 | 1.8 | ||
Daucus carota (Daucus carota subsp. sativus strain DH1) | 750 | 3245 | 2 | 48 | 4.3 | 1 | 1 | 1.0 | 4.3 | ||
Daisy family (Asteraceae) | 517 | 2785 | 2 | 38 | 5.4 | 2 | 3 | 2.3 | 2.3 | ||
Helianthus annuus (Helianthus annuus cultivar XRQ/B) | 2394 | 11942 | 2 | 51 | 5.0 | 1 | 1 | 1.0 | 5.0 | ||
Daisy family (Asteraceae) | 64 | 188 | 2 | 11 | 2.9 | 2 | 2 | 2.0 | 1.5 | ||
Lactuca sativa (Lactuca sativa cultivar Salinas) | 867 | 3846 | 2 | 42 | 4.4 | 1 | 1 | 1.0 | 4.4 | ||
Cynara cardunculus (Cynara cardunculus var. scolymus) | 176 | 590 | 2 | 33 | 3.4 | 1 | 1 | 1.0 | 3.4 | ||
lamiids | 120 | 661 | 2 | 30 | 5.5 | 2 | 9 | 3.3 | 1.6 | ||
lamiids | 215 | 1028 | 2 | 31 | 4.8 | 2 | 7 | 2.9 | 1.5 | ||
Lamiales | 92 | 456 | 2 | 17 | 5.0 | 2 | 3 | 2.5 | 1.9 | ||
Oleeae | 350 | 1357 | 2 | 34 | 3.9 | 2 | 2 | 2.0 | 1.9 | ||
Fraxinus excelsior (Fraxinus excelsior reference strain) | 101 | 216 | 2 | 6 | 2.1 | 1 | 1 | 1.0 | 2.1 | ||
Olea europaea (Olea europaea subsp. europaea variety Farga) | 1062 | 4379 | 2 | 56 | 4.1 | 1 | 1 | 1.0 | 4.1 | ||
Sesamum indicum (Sesamum indicum strain Zhongzhi No. 13) | 346 | 1956 | 2 | 47 | 5.7 | 1 | 1 | 1.0 | 5.7 | ||
Solanales | 109 | 697 | 2 | 46 | 6.4 | 2 | 5 | 3.1 | 1.9 | ||
Ipomoea triloba (Ipomoea triloba strain NCNSP0323) | 330 | 1281 | 2 | 42 | 3.9 | 1 | 1 | 1.0 | 3.9 | ||
Nightshade family (Solanaceae) | 451 | 4416 | 2 | 54 | 9.8 | 2 | 4 | 2.9 | 3.3 | ||
Solanoideae | 397 | 2529 | 2 | 39 | 6.4 | 2 | 3 | 2.4 | 2.6 | ||
Solanum | 432 | 1817 | 2 | 37 | 4.2 | 2 | 2 | 2.0 | 2.1 | ||
Solanum lycopersicum (Solanum lycopersicum strain Heinz 1706) | 356 | 1223 | 2 | 56 | 3.4 | 1 | 1 | 1.0 | 3.4 | ||
Solanum tuberosum (Solanum tuberosum cultivar DM 1-3 516 R44) | 968 | 6501 | 2 | 54 | 6.7 | 1 | 1 | 1.0 | 6.7 | ||
Capsicum annuum (Capsicum annuum strain Criollo de Morelos 334) | 513 | 2834 | 2 | 47 | 5.5 | 1 | 1 | 1.0 | 5.5 | ||
Nicotiana attenuata (Nicotiana attenuata strain UT) | 304 | 1611 | 2 | 42 | 5.3 | 1 | 1 | 1.0 | 5.3 | ||
Coffea canephora (Coffea canephora strain DH200-94) | 181 | 546 | 2 | 17 | 3.0 | 1 | 1 | 1.0 | 3.0 | ||
Actinidia chinensis (Actinidia chinensis var. chinensis strain Red5) | 75 | 251 | 2 | 23 | 3.3 | 1 | 1 | 1.0 | 3.3 | ||
Pentapetalae | 253 | 1543 | 2 | 57 | 6.1 | 2 | 37 | 4.3 | 1.4 | ||
Kalanchoe fedtschenkoi (Kalanchoe fedtschenkoi) | 425 | 1267 | 2 | 53 | 3.0 | 1 | 1 | 1.0 | 3.0 | ||
rosids | 1262 | 10583 | 2 | 1468 | 8.4 | 2 | 42 | 4.4 | 1.5 | ||
rosids | 522 | 4155 | 2 | 107 | 8.0 | 2 | 30 | 4.9 | 1.7 | ||
rosids | 355 | 2147 | 2 | 41 | 6.0 | 2 | 30 | 4.2 | 1.4 | ||
Eucalypteae | 732 | 2783 | 2 | 52 | 3.8 | 2 | 2 | 2.0 | 1.9 | ||
Corymbia citriodora (Corymbia citriodora subsp. variegata genotype CCV2-018) | 181 | 548 | 2 | 34 | 3.0 | 1 | 1 | 1.0 | 3.0 | ||
Eucalyptus grandis (Eucalyptus grandis strain BRASUZ1) | 164 | 426 | 2 | 20 | 2.6 | 1 | 1 | 1.0 | 2.6 | ||
rosids | 1092 | 6776 | 2 | 50 | 6.2 | 2 | 24 | 3.6 | 1.7 | ||
fabids | 244 | 1170 | 2 | 34 | 4.8 | 2 | 14 | 3.1 | 1.4 | ||
fabids | 716 | 3336 | 2 | 54 | 4.7 | 2 | 14 | 3.0 | 1.5 | ||
fabids | 310 | 1376 | 2 | 38 | 4.4 | 2 | 9 | 2.8 | 1.5 | ||
Fagales | 138 | 882 | 2 | 45 | 6.4 | 2 | 4 | 2.6 | 2.3 | ||
Fagales | 13 | 117 | 2 | 29 | 9.0 | 2 | 2 | 2.0 | 4.5 | ||
Corylus avellana (Corylus avellana cultivar Tombul) | 206 | 967 | 2 | 41 | 4.7 | 1 | 1 | 1.0 | 4.7 | ||
Juglans regia (Juglans regia cultivar Chandler) | 170 | 1156 | 2 | 50 | 6.8 | 1 | 1 | 1.0 | 6.8 | ||
Quercus | 1074 | 8514 | 2 | 50 | 7.9 | 2 | 2 | 2.0 | 4.0 | ||
Quercus suber (Quercus suber reference strain) | 1576 | 6307 | 2 | 50 | 4.0 | 1 | 1 | 1.0 | 4.0 | ||
Quercus lobata (Quercus lobata) | 190 | 578 | 2 | 34 | 3.0 | 1 | 1 | 1.0 | 3.0 | ||
Rosales | 115 | 478 | 2 | 34 | 4.2 | 2 | 7 | 2.8 | 1.4 | ||
Rose family (Rosaceae) | 353 | 2753 | 2 | 46 | 7.8 | 2 | 5 | 3.1 | 2.4 | ||
Rosa chinensis (Rosa chinensis) | 1189 | 3895 | 2 | 38 | 3.3 | 1 | 1 | 1.0 | 3.3 | ||
Amygdaloideae | 130 | 810 | 2 | 45 | 6.2 | 2 | 4 | 2.8 | 2.2 | ||
Malus domestica Golden (Malus domestica strain Golden Delicious) | 330 | 1060 | 2 | 36 | 3.2 | 1 | 1 | 1.0 | 3.2 | ||
Prunus | 1297 | 6717 | 2 | 55 | 5.2 | 2 | 3 | 2.2 | 2.3 | ||
Prunus | 123 | 406 | 2 | 31 | 3.3 | 2 | 2 | 2.0 | 1.7 | ||
Prunus dulcis (Prunus dulcis strain Texas) | 121 | 376 | 2 | 19 | 3.1 | 1 | 1 | 1.0 | 3.1 | ||
Prunus persica (Prunus persica strain Lovell) | 63 | 155 | 2 | 5 | 2.5 | 1 | 1 | 1.0 | 2.5 | ||
Prunus avium (Prunus avium strain Satonishiki) | 1366 | 6817 | 2 | 49 | 5.0 | 1 | 1 | 1.0 | 5.0 | ||
Rosales | 69 | 300 | 2 | 18 | 4.3 | 2 | 2 | 2.0 | 2.2 | ||
Ficus carica (Ficus carica cultivar Dottato) | 1280 | 3641 | 2 | 33 | 2.8 | 1 | 1 | 1.0 | 2.8 | ||
Cannabis sativa female (Cannabis sativa) | 756 | 4035 | 2 | 49 | 5.3 | 1 | 1 | 1.0 | 5.3 | ||
50 kb inversion clade | 418 | 5356 | 2 | 48 | 12.8 | 2 | 11 | 6.6 | 2.0 | ||
Lupinus angustifolius (Lupinus angustifolius strain Tanjil) | 213 | 639 | 2 | 11 | 3.0 | 1 | 1 | 1.0 | 3.0 | ||
NPAAA clade | 794 | 6376 | 2 | 57 | 8.0 | 2 | 10 | 3.5 | 2.4 | ||
IRL clade | 438 | 2972 | 2 | 54 | 6.8 | 2 | 3 | 2.4 | 2.7 | ||
Pisum sativum (Pisum sativum cultivar Cameor) | 1555 | 7285 | 2 | 42 | 4.7 | 1 | 1 | 1.0 | 4.7 | ||
Trifolieae | 335 | 1946 | 2 | 48 | 5.8 | 2 | 2 | 2.0 | 2.9 | ||
Medicago truncatula (Medicago truncatula strain A17) | 1325 | 5356 | 2 | 50 | 4.0 | 1 | 1 | 1.0 | 4.0 | ||
Trifolium pratense (Trifolium pratense strain Milvus B) | 475 | 1475 | 2 | 26 | 3.1 | 1 | 1 | 1.0 | 3.1 | ||
Phaseoleae | 337 | 3744 | 2 | 54 | 11.1 | 2 | 7 | 3.2 | 3.8 | ||
Cajanus cajan (pigeon pea) - GCA_000340665.1 (Cajanus cajan) | 706 | 5574 | 2 | 52 | 7.9 | 1 | 1 | 1.0 | 7.9 | ||
Phaseoleae | 294 | 1592 | 2 | 49 | 5.4 | 2 | 6 | 3.0 | 1.8 | ||
Glycine subgen. Soja | 258 | 1143 | 2 | 49 | 4.4 | 2 | 2 | 2.0 | 2.2 | ||
Glycine soja (Wild soybean) (Glycine soja) | 132 | 1331 | 2 | 50 | 10.1 | 1 | 1 | 1.0 | 10.1 | ||
Glycine max (Glycine max strain Williams 82) | 186 | 560 | 2 | 37 | 3.0 | 1 | 1 | 1.0 | 3.0 | ||
Phaseoleae | 170 | 870 | 2 | 32 | 5.1 | 2 | 4 | 2.4 | 2.1 | ||
Phaseolus vulgaris (Phaseolus vulgaris strain G19833) | 55 | 264 | 2 | 41 | 4.8 | 1 | 1 | 1.0 | 4.8 | ||
Vigna | 89 | 521 | 2 | 34 | 5.9 | 2 | 3 | 2.1 | 2.6 | ||
Vigna | 98 | 832 | 2 | 51 | 8.5 | 2 | 2 | 2.0 | 4.2 | ||
Vigna angularis (Vigna angularis strain Jingnong 6) | 891 | 5040 | 2 | 55 | 5.7 | 1 | 1 | 1.0 | 5.7 | ||
Vigna radiata (Vigna radiata var. radiata strain VC1973A) | 52 | 129 | 2 | 16 | 2.5 | 1 | 1 | 1.0 | 2.5 | ||
Vigna unguiculata (Vigna unguiculata strain IT97K-499-35) | 221 | 910 | 2 | 43 | 4.1 | 1 | 1 | 1.0 | 4.1 | ||
Benincaseae | 587 | 2114 | 2 | 39 | 3.6 | 2 | 3 | 2.6 | 1.4 | ||
Citrullus lanatus (Citrullus lanatus strain 97103) | 40 | 131 | 2 | 24 | 3.3 | 1 | 1 | 1.0 | 3.3 | ||
Cucumis | 283 | 954 | 2 | 45 | 3.4 | 2 | 2 | 2.0 | 1.7 | ||
Cucumis sativus (Cucumis sativus strain 9930) | 61 | 153 | 2 | 8 | 2.5 | 1 | 1 | 1.0 | 2.5 | ||
Cucumis melo (Cucumis melo) | 721 | 3270 | 2 | 48 | 4.5 | 1 | 1 | 1.0 | 4.5 | ||
rosids | 91 | 627 | 2 | 43 | 6.9 | 2 | 7 | 3.2 | 2.1 | ||
malvids | 47 | 241 | 2 | 28 | 5.1 | 2 | 5 | 2.7 | 1.8 | ||
Mallow family (Malvaceae) | 260 | 1378 | 2 | 49 | 5.3 | 2 | 3 | 2.4 | 2.2 | ||
Gossypium raimondii (Gossypium raimondii) | 264 | 881 | 2 | 29 | 3.3 | 1 | 1 | 1.0 | 3.3 | ||
Mallow family (Malvaceae) | 93 | 415 | 2 | 30 | 4.5 | 2 | 2 | 2.0 | 2.2 | ||
Theobroma cacao Matina 1-6 (Theobroma cacao reference (Matina) cultivar) | 350 | 1636 | 2 | 48 | 4.7 | 1 | 1 | 1.0 | 4.7 | ||
Corchorus capsularis (Corchorus capsularis strain CVL-1) | 579 | 1702 | 2 | 24 | 2.9 | 1 | 1 | 1.0 | 2.9 | ||
Sapindales | 43 | 154 | 2 | 12 | 3.6 | 2 | 2 | 2.0 | 1.8 | ||
Pistacia vera (Pistacia vera strain Batoury) | 222 | 542 | 2 | 11 | 2.4 | 1 | 1 | 1.0 | 2.4 | ||
Citrus clementina (Citrus clementina strain Clemenules) | 115 | 337 | 2 | 9 | 2.9 | 1 | 1 | 1.0 | 2.9 | ||
Malpighiales | 41 | 167 | 2 | 16 | 4.1 | 2 | 2 | 2.0 | 2.0 | ||
Manihot esculenta (Manihot esculenta strain AM560-2) | 216 | 723 | 2 | 34 | 3.3 | 1 | 1 | 1.0 | 3.3 | ||
Populus trichocarpa (Populus trichocarpa) | 190 | 703 | 2 | 38 | 3.7 | 1 | 1 | 1.0 | 3.7 | ||
Vitis vinifera (Vitis vinifera strain PN40024) | 912 | 3290 | 2 | 50 | 3.6 | 1 | 1 | 1.0 | 3.6 | ||
Mustard family (Brassicaceae) | 2417 | 31141 | 2 | 148 | 12.9 | 2 | 12 | 6.5 | 1.9 | ||
Camelineae | 451 | 3237 | 2 | 49 | 7.2 | 2 | 6 | 3.6 | 1.8 | ||
Arabidopsis | 217 | 1064 | 2 | 48 | 4.9 | 2 | 3 | 2.3 | 2.1 | ||
Arabidopsis thaliana (Arabidopsis thaliana strain Columbia) | 54 | 134 | 2 | 6 | 2.5 | 1 | 1 | 1.0 | 2.5 | ||
Arabidopsis | 463 | 1826 | 2 | 51 | 3.9 | 2 | 2 | 2.0 | 2.0 | ||
Arabidopsis halleri (Arabidopsis halleri subsp. gemmifera strain W302) | 271 | 1514 | 2 | 62 | 5.6 | 1 | 1 | 1.0 | 5.6 | ||
Arabidopsis lyrata (Arabidopsis lyrata subsp. lyrata strain MN47) | 264 | 784 | 2 | 28 | 3.0 | 1 | 1 | 1.0 | 3.0 | ||
False flax (Camelina sativa) | 365 | 1430 | 2 | 44 | 3.9 | 2 | 3 | 2.3 | 1.6 | ||
Camelina sativa (component G2) (Camelina sativa strain dh55 (component G2)) | 35 | 76 | 2 | 4 | 2.2 | 1 | 1 | 1.0 | 2.2 | ||
False flax (Camelina sativa) | 146 | 407 | 2 | 12 | 2.8 | 2 | 2 | 2.0 | 1.4 | ||
Camelina sativa (component G3) (Camelina sativa strain dh55 (component G3)) | 82 | 198 | 2 | 7 | 2.4 | 1 | 1 | 1.0 | 2.4 | ||
Camelina sativa (component G1) (Camelina sativa strain dh55 (component G1)) | 29 | 64 | 2 | 4 | 2.2 | 1 | 1 | 1.0 | 2.2 | ||
Mustard family (Brassicaceae) | 111 | 982 | 2 | 44 | 8.8 | 2 | 6 | 3.2 | 2.6 | ||
Mustard family (Brassicaceae) | 113 | 1069 | 2 | 48 | 9.5 | 2 | 5 | 3.4 | 2.5 | ||
Eutrema salsugineum (Eutrema salsugineum) | 54 | 303 | 2 | 47 | 5.6 | 1 | 1 | 1.0 | 5.6 | ||
Brassica | 4015 | 27610 | 2 | 56 | 6.9 | 2 | 4 | 2.7 | 2.4 | ||
Brassica | 2151 | 6370 | 2 | 50 | 3.0 | 2 | 2 | 2.0 | 1.5 | ||
Brassica napus (Brassica napus strain Darmor-bzh) | 685 | 1679 | 2 | 29 | 2.5 | 1 | 1 | 1.0 | 2.5 | ||
Brassica oleracea (Brassica oleracea var. oleracea strain TO1000) | 340 | 1782 | 2 | 45 | 5.2 | 1 | 1 | 1.0 | 5.2 | ||
Brassica | 517 | 2534 | 2 | 48 | 4.9 | 2 | 2 | 2.0 | 2.5 | ||
Brassica juncea (Brassica juncea cultivar Sichuan Huangzi) | 700 | 2640 | 2 | 47 | 3.8 | 1 | 1 | 1.0 | 3.8 | ||
Brassica rapa R-o-18 (Brassica rapa subsp. trilocularis cultivar R-o-18) | 454 | 2271 | 2 | 57 | 5.0 | 1 | 1 | 1.0 | 5.0 | ||
Arabis alpina (Arabis alpina) | 256 | 1707 | 2 | 56 | 6.7 | 1 | 1 | 1.0 | 6.7 | ||
Petrosaviidae | 645 | 13068 | 2 | 214 | 20.3 | 2 | 43 | 13.4 | 1.4 | ||
commelinids | 369 | 11531 | 2 | 174 | 31.2 | 2 | 42 | 21.7 | 1.4 | ||
Poales | 359 | 6986 | 2 | 129 | 19.5 | 2 | 40 | 13.1 | 1.4 | ||
Grass family (Poaceae) | 7626 | 160004 | 2 | 466 | 21.0 | 2 | 40 | 12.6 | 1.5 | ||
BEP clade (BOP clade) | 1034 | 7369 | 2 | 66 | 7.1 | 2 | 27 | 5.1 | 1.3 | ||
Pooideae | 510 | 6849 | 2 | 130 | 13.4 | 2 | 15 | 5.7 | 2.0 | ||
Brachypodium distachyon (Brachypodium distachyon strain Bd21) | 292 | 795 | 2 | 17 | 2.7 | 1 | 1 | 1.0 | 2.7 | ||
Pooideae | 759 | 7359 | 2 | 109 | 9.7 | 2 | 14 | 4.6 | 2.0 | ||
Poeae | 179 | 1290 | 2 | 53 | 7.2 | 2 | 3 | 2.1 | 3.3 | ||
Oats (Avena sativa) | 29 | 152 | 2 | 21 | 5.2 | 2 | 2 | 2.0 | 2.6 | ||
Avena sativa Sang (Avena sativa strain sang) | 27 | 78 | 2 | 21 | 2.9 | 1 | 1 | 1.0 | 2.9 | ||
Avena sativa OT3098 (Avena sativa strain OT3098) | 1349 | 3937 | 2 | 49 | 2.9 | 1 | 1 | 1.0 | 2.9 | ||
Lolium perenne (Lolium perenne reference strain) | 883 | 2856 | 2 | 48 | 3.2 | 1 | 1 | 1.0 | 3.2 | ||
Triticeae | 412 | 4564 | 2 | 89 | 11.1 | 2 | 11 | 4.7 | 2.3 | ||
Triticeae | 145 | 1261 | 2 | 44 | 8.7 | 2 | 9 | 4.5 | 1.9 | ||
Secale cereale (Secale cereale) | 27 | 122 | 2 | 23 | 4.5 | 1 | 1 | 1.0 | 4.5 | ||
Triticinae | 1151 | 5840 | 2 | 34 | 5.1 | 2 | 9 | 3.1 | 1.6 | ||
Triticinae | 440 | 1643 | 2 | 43 | 3.7 | 2 | 6 | 2.6 | 1.4 | ||
Triticinae | 77 | 195 | 2 | 13 | 2.5 | 2 | 2 | 2.0 | 1.3 | ||
Triticum aestivum (component D) (Triticum aestivum reference (Chinese spring) cultivar (component D)) | 6 | 13 | 2 | 3 | 2.2 | 1 | 1 | 1.0 | 2.2 | ||
Aegilops tauschii (Aegilops tauschii subsp. strangulata strain AL8/78) | 152 | 697 | 2 | 32 | 4.6 | 1 | 1 | 1.0 | 4.6 | ||
Triticum | 297 | 898 | 2 | 11 | 3.0 | 2 | 4 | 2.4 | 1.3 | ||
Triticum | 62 | 170 | 2 | 8 | 2.7 | 2 | 3 | 2.3 | 1.2 | ||
Triticum dicoccoides (component A) (Triticum dicoccoides strain Zavitan (Atlit2015) (component A)) | 55 | 128 | 2 | 4 | 2.3 | 1 | 1 | 1.0 | 2.3 | ||
Triticum | 481 | 1157 | 2 | 12 | 2.4 | 2 | 2 | 2.0 | 1.2 | ||
Triticum turgidum (component A) (Triticum turgidum subsp. durum strain svevo (component A)) | 16 | 36 | 2 | 3 | 2.2 | 1 | 1 | 1.0 | 2.2 | ||
Triticum aestivum (component A) (Triticum aestivum reference (Chinese spring) cultivar (component A)) | 11 | 23 | 2 | 3 | 2.1 | 1 | 1 | 1.0 | 2.1 | ||
Triticum urartu (Triticum urartu strain G1812 (PI428198)) | 628 | 1462 | 2 | 8 | 2.3 | 1 | 1 | 1.0 | 2.3 | ||
Triticum | 103 | 287 | 2 | 8 | 2.8 | 2 | 3 | 2.2 | 1.3 | ||
Triticum dicoccoides (component B) (Triticum dicoccoides strain Zavitan (Atlit2015) (component B)) | 108 | 238 | 2 | 4 | 2.2 | 1 | 1 | 1.0 | 2.2 | ||
Triticum | 59 | 191 | 2 | 25 | 3.2 | 2 | 2 | 2.0 | 1.6 | ||
Triticum turgidum (component B) (Triticum turgidum subsp. durum strain svevo (component B)) | 36 | 93 | 2 | 9 | 2.6 | 1 | 1 | 1.0 | 2.6 | ||
Triticum aestivum (component B) (Triticum aestivum reference (Chinese spring) cultivar (component B)) | 15 | 35 | 2 | 3 | 2.3 | 1 | 1 | 1.0 | 2.3 | ||
Hordeum vulgare (Hordeum vulgare subsp. vulgare cultivar Morex) | 545 | 3030 | 2 | 37 | 5.6 | 1 | 1 | 1.0 | 5.6 | ||
Oryzinae | 1081 | 7764 | 2 | 55 | 7.2 | 2 | 12 | 5.5 | 1.2 | ||
Oryza brachyantha (Oryza brachyantha cultivar IRGC:101232) | 226 | 575 | 2 | 16 | 2.5 | 1 | 1 | 1.0 | 2.5 | ||
Oryzinae | 574 | 4634 | 2 | 46 | 8.1 | 2 | 11 | 5.8 | 1.3 | ||
Oryza | 1337 | 9318 | 2 | 72 | 7.0 | 2 | 10 | 5.0 | 1.3 | ||
Oryza | 2919 | 14695 | 2 | 46 | 5.0 | 2 | 9 | 4.1 | 1.2 | ||
Oryza meridionalis (Oryza meridionalis cultivar OR44 (W2112)) | 74 | 159 | 2 | 4 | 2.1 | 1 | 1 | 1.0 | 2.1 | ||
Oryza | 903 | 3551 | 2 | 22 | 3.9 | 2 | 8 | 3.5 | 1.1 | ||
Oryza | 3004 | 11748 | 2 | 29 | 3.9 | 2 | 7 | 3.5 | 1.1 | ||
Oryza glumipatula (Oryza glumipatula) | 24 | 50 | 2 | 3 | 2.1 | 1 | 1 | 1.0 | 2.1 | ||
Oryza | 1877 | 5768 | 2 | 28 | 3.1 | 2 | 6 | 2.8 | 1.1 | ||
Oryza | 85 | 196 | 2 | 7 | 2.3 | 2 | 2 | 2.0 | 1.2 | ||
Oryza glaberrima (Oryza glaberrima cultivar CG14) | 126 | 536 | 2 | 27 | 4.3 | 1 | 1 | 1.0 | 4.3 | ||
Oryza barthii (Oryza barthii cultivar IRGC:105608) | 39 | 80 | 2 | 3 | 2.1 | 1 | 1 | 1.0 | 2.1 | ||
Oryza | 822 | 1954 | 2 | 7 | 2.4 | 2 | 4 | 2.2 | 1.1 | ||
Oryza nivara (Oryza nivara cultivar IRGC:100897) | 19 | 43 | 2 | 6 | 2.3 | 1 | 1 | 1.0 | 2.3 | ||
Oryza | 315 | 711 | 2 | 9 | 2.3 | 2 | 3 | 2.1 | 1.1 | ||
Oryza sativa Indica Group (Oryza sativa Indica Group strain 93-11) | 157 | 386 | 2 | 8 | 2.5 | 1 | 1 | 1.0 | 2.5 | ||
Oryza | 91 | 202 | 2 | 4 | 2.2 | 2 | 2 | 2.0 | 1.1 | ||
Oryza sativa Japonica Group (Oryza sativa Japonica Group reference (Nipponbare) cultivar) | 239 | 557 | 2 | 13 | 2.3 | 1 | 1 | 1.0 | 2.3 | ||
Oryza rufipogon (Oryza rufipogon cultivar W1943) | 29 | 59 | 2 | 3 | 2.0 | 1 | 1 | 1.0 | 2.0 | ||
Oryza longistaminata (Oryza longistaminata) | 120 | 253 | 2 | 3 | 2.1 | 1 | 1 | 1.0 | 2.1 | ||
Oryza punctata (Oryza punctata cultivar IRGC:105690) | 166 | 394 | 2 | 9 | 2.4 | 1 | 1 | 1.0 | 2.4 | ||
Leersia perrieri (Leersia perrieri cultivar IRGC:105164) | 168 | 546 | 2 | 49 | 3.2 | 1 | 1 | 1.0 | 3.2 | ||
PACMAD clade | 1461 | 9871 | 2 | 45 | 6.8 | 2 | 13 | 3.5 | 1.8 | ||
Eragrostis | 450 | 2178 | 2 | 40 | 4.8 | 2 | 2 | 2.0 | 2.4 | ||
Eragrostis tef (Eragrostis tef cultivar Dabbi) | 822 | 2429 | 2 | 35 | 3.0 | 1 | 1 | 1.0 | 3.0 | ||
Eragrostis curvula (Eragrostis curvula strain Tanganyika) | 1564 | 5181 | 2 | 56 | 3.3 | 1 | 1 | 1.0 | 3.3 | ||
Panicoideae | 803 | 4011 | 2 | 43 | 5.0 | 2 | 10 | 3.1 | 1.5 | ||
Paniceae | 352 | 1511 | 2 | 53 | 4.3 | 2 | 5 | 2.4 | 1.7 | ||
Paniceae | 353 | 1708 | 2 | 43 | 4.8 | 2 | 4 | 2.4 | 2.0 | ||
Echinochloa crus-galli (Echinochloa crus-galli reference strain) | 3004 | 10444 | 2 | 59 | 3.5 | 1 | 1 | 1.0 | 3.5 | ||
Paniceae | 150 | 466 | 2 | 32 | 3.1 | 2 | 3 | 2.2 | 1.4 | ||
Panicum hallii HAL2 (Panicum hallii var. hallii reference (HAL2) ecotype) | 215 | 812 | 2 | 54 | 3.8 | 1 | 1 | 1.0 | 3.8 | ||
Setaria | 507 | 1374 | 2 | 46 | 2.7 | 2 | 2 | 2.0 | 1.4 | ||
Setaria viridis (Setaria viridis strain A10) | 267 | 798 | 2 | 35 | 3.0 | 1 | 1 | 1.0 | 3.0 | ||
Setaria italica (Setaria italica strain Yugu1) | 69 | 175 | 2 | 11 | 2.5 | 1 | 1 | 1.0 | 2.5 | ||
Digitaria exilis (Digitaria exilis strain digitaria_exilis) | 846 | 2023 | 2 | 35 | 2.4 | 1 | 1 | 1.0 | 2.4 | ||
Andropogoneae | 187 | 723 | 2 | 37 | 3.9 | 2 | 6 | 2.4 | 1.5 | ||
Zea mays (Zea mays strain B73) | 633 | 2205 | 2 | 34 | 3.5 | 1 | 1 | 1.0 | 3.5 | ||
Andropogoneae | 173 | 541 | 2 | 35 | 3.1 | 2 | 5 | 2.3 | 1.3 | ||
Fodder cane (Saccharum spontaneum) | 233 | 623 | 2 | 21 | 2.7 | 2 | 4 | 2.2 | 1.1 | ||
Saccharum spontaneum (component C) (Saccharum spontaneum strain AP85-441 (component C)) | 12 | 24 | 2 | 2 | 2.0 | 1 | 1 | 1.0 | 2.0 | ||
Fodder cane (Saccharum spontaneum) | 147 | 333 | 2 | 9 | 2.3 | 2 | 3 | 2.1 | 1.1 | ||
Saccharum spontaneum (component A) (Saccharum spontaneum strain AP85-441 (component A)) | 22 | 48 | 2 | 3 | 2.2 | 1 | 1 | 1.0 | 2.2 | ||
Fodder cane (Saccharum spontaneum) | 82 | 177 | 2 | 5 | 2.2 | 2 | 2 | 2.0 | 1.1 | ||
Saccharum spontaneum (component D) (Saccharum spontaneum strain AP85-441 (component D)) | 23 | 46 | 2 | 2 | 2.0 | 1 | 1 | 1.0 | 2.0 | ||
Saccharum spontaneum (component B) (Saccharum spontaneum strain AP85-441 (component B)) | 27 | 56 | 2 | 4 | 2.1 | 1 | 1 | 1.0 | 2.1 | ||
Sorghum bicolor (Sorghum bicolor strain BTx623) | 273 | 789 | 2 | 39 | 2.9 | 1 | 1 | 1.0 | 2.9 | ||
Ananas comosus (Ananas comosus strain F153) | 572 | 2211 | 2 | 34 | 3.9 | 1 | 1 | 1.0 | 3.9 | ||
Musa acuminata (Musa acuminata subsp. malaccensis cultivar Doubled-haploid Pahang (DH-Pahang)) | 158 | 525 | 2 | 47 | 3.3 | 1 | 1 | 1.0 | 3.3 | ||
Petrosaviidae | 27 | 69 | 2 | 5 | 2.6 | 2 | 2 | 2.0 | 1.3 | ||
Asparagus officinalis (Asparagus officinalis strain DH00/086) | 621 | 2552 | 2 | 51 | 4.1 | 1 | 1 | 1.0 | 4.1 | ||
Dioscorea rotundata (Dioscorea cayenensis subsp. rotundata) | 1073 | 4894 | 2 | 50 | 4.6 | 1 | 1 | 1.0 | 4.6 | ||
Flowering plants (Magnoliopsida) | 50 | 183 | 2 | 34 | 3.7 | 2 | 2 | 2.0 | 1.8 | ||
Amborella trichopoda (Amborella trichopoda) | 901 | 3577 | 2 | 46 | 4.0 | 1 | 1 | 1.0 | 4.0 | ||
Nymphaea colorata (Nymphaea colorata strain Beijing-Zhang1983) | 791 | 4134 | 2 | 56 | 5.2 | 1 | 1 | 1.0 | 5.2 | ||
Triticum turgidum (component U) (Triticum turgidum subsp. durum strain svevo (component U)) | 2 | 5 | 2 | 3 | 2.5 | 1 | 1 | 1.0 | 2.5 | ||
Triticum aestivum (component U) (Triticum aestivum reference (Chinese spring) cultivar (component U)) | 1 | 3 | 3 | 3 | 3.0 | 1 | 1 | 1.0 | 3.0 | ||
Chara braunii (Chara braunii strain S276) | 1362 | 16125 | 2 | 1367 | 11.8 | 1 | 1 | 1.0 | 11.8 | ||
Green algae (Chlorophyta) | 185 | 484 | 2 | 20 | 2.6 | 2 | 2 | 2.0 | 1.3 | ||
Ostreococcus lucimarinus (Ostreococcus lucimarinus CCE9901) | 148 | 362 | 2 | 15 | 2.4 | 1 | 1 | 1.0 | 2.4 | ||
Chlamydomonas reinhardtii (Chlamydomonas reinhardtii strain CC-503 cw92 mt+) | 937 | 3612 | 2 | 40 | 3.9 | 1 | 1 | 1.0 | 3.9 | ||
Animals and Fungi (Opisthokonta) | 160 | 1021 | 2 | 112 | 6.4 | 2 | 5 | 3.6 | 1.3 | ||
Saccharomyces cerevisiae (Saccharomyces cerevisiae S288C) | 282 | 749 | 2 | 29 | 2.7 | 1 | 1 | 1.0 | 2.6 | ||
Bilateral animals (Bilateria) | 1851 | 9034 | 2 | 195 | 4.9 | 2 | 4 | 2.9 | 1.4 | ||
Caenorhabditis elegans (Nematode, N2) (Caenorhabditis elegans strain N2) | 1500 | 7686 | 2 | 283 | 5.1 | 1 | 1 | 1.0 | 4.5 | ||
Bilateral animals (Bilateria) | 817 | 2696 | 2 | 41 | 3.3 | 2 | 3 | 2.4 | 1.4 | ||
Drosophila melanogaster (Fruit fly) (Drosophila melanogaster) | 642 | 2508 | 2 | 55 | 3.9 | 1 | 1 | 1.0 | 3.6 | ||
Chordates (Chordata) | 849 | 2160 | 2 | 26 | 2.5 | 2 | 2 | 2.0 | 1.2 | ||
C.savignyi (Ciona savignyi) | 274 | 935 | 2 | 53 | 3.4 | 1 | 1 | 1.0 | 3.4 | ||
Human (Homo sapiens) | 813 | 3288 | 2 | 97 | 4.0 | 1 | 1 | 1.0 | 3.6 |