Vigna unguiculata IT97K-499-35 Assembly and Gene Annotation
About Vigna unguiculata
The cowpea (Vigna unguiculata) is an annual herbaceous legume from the genus Vigna. It can be erect, semierect (trailing), or climbing. A high level of morphological diversity is found within the species with large variations in the size, shape, and structure of the plant. Four subspecies are recognised, three of which are cultivated.
Assembly
The assembly presented here has been imported from INSDC and is linked to the assembly accession GCA_004118075.2.
The total length of the assembly is 518595462 bp contained within 675 scaffolds. The scaffold N50 value is 41684185, the scaffold L50 value is 6. The GC% content of the assembly is 33.0%.
Annotation
Annotation is imported from NCBI RefSeq.
Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Plants.
References
- The genome of cowpea (Vigna unguiculata [L.] Walp.).
Lonardi S, Muñoz-Amatriaín M, Liang Q, Shu S, Wanamaker SI, Lo S, Tanskanen J, Schulman AH, Zhu T, Luo MC, Alhakami H, Ounit R, Hasan AM, Verdier J, Roberts PA, Santos JRP, Ndeve A, Doležel J, Vrána J, Hokin SA, Farmer AD, Cannon SB, Close TJ.. Plant J 98 (5)
Picture credit: Creative Commons Attribution-Share Alike 2.0 Generic via Wikimedia Commons (Image source)
Statistics
Summary
| Assembly | ASM411807v2, INSDC Assembly GCA_004118075.2, |
| Database version | 116.1 |
| Golden Path Length | 518,747,877 |
| Genebuild by | NCBI RefSeq |
| Genebuild method | Import |
| Data source | University of California, Riverside |
Gene counts
| Coding genes | 28,223 |
| Non coding genes | 4,855 |
| Small non coding genes | 3,114 |
| Long non coding genes | 1,740 |
| Misc non coding genes | 1 |
| Pseudogenes | 1,214 |
| Gene transcripts | 50,934 |


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