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Vigna unguiculata IT97K-499-35 (ASM411807v2)

Vigna unguiculata IT97K-499-35 Assembly and Gene Annotation

About Vigna unguiculata

The cowpea (Vigna unguiculata) is an annual herbaceous legume from the genus Vigna. It can be erect, semierect (trailing), or climbing. A high level of morphological diversity is found within the species with large variations in the size, shape, and structure of the plant. Four subspecies are recognised, three of which are cultivated.

Assembly

The assembly presented here has been imported from INSDC and is linked to the assembly accession GCA_004118075.2.

The total length of the assembly is 518595462 bp contained within 675 scaffolds. The scaffold N50 value is 41684185, the scaffold L50 value is 6. The GC% content of the assembly is 33.0%.

Annotation

Annotation is imported from NCBI RefSeq.

Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Plants.

References

  • The genome of cowpea (Vigna unguiculata [L.] Walp.).
    Lonardi S, Muñoz-Amatriaín M, Liang Q, Shu S, Wanamaker SI, Lo S, Tanskanen J, Schulman AH, Zhu T, Luo MC, Alhakami H, Ounit R, Hasan AM, Verdier J, Roberts PA, Santos JRP, Ndeve A, Doležel J, Vrána J, Hokin SA, Farmer AD, Cannon SB, Close TJ.. Plant J 98 (5)

Picture credit: Creative Commons Attribution-Share Alike 2.0 Generic via Wikimedia Commons (Image source)

Statistics

Summary

AssemblyASM411807v2, INSDC Assembly GCA_004118075.2,
Database version116.1
Golden Path Length518,747,877
Genebuild byNCBI RefSeq
Genebuild methodImport
Data sourceUniversity of California, Riverside

Gene counts

Coding genes28,223
Non coding genes4,855
Small non coding genes3,114
Long non coding genes1,740
Misc non coding genes1
Pseudogenes1,214
Gene transcripts50,934