Brassica rapa Z1 Assembly and Gene Annotation

About Brassica rapa

Brassica rapa is a plant species growing in various widely cultivated forms including the turnip ; Komatsuna, napa cabbage, bomdong, bok choy, and rapini.

Assembly

The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_900412535.3].

The total length of the assembly is 443953949 bp contained within 210 scaffolds. The scaffold N50 value is 39217719, the scaffold L50 value is 5. The GC% content of the assembly is 38.0%.

Annotation

The annotation presented is derived from genes imported from the community GFF3 with the assembly accession GCA_900412535.3.

Genomic annotation was deposited along with initial assembly submission by "Genoscope".

Protein features, BLAST hits and cross-references have been computed by Ensembl Plants.

References

1. Chromosome-scale assemblies of plant genomes using nanopore long reads and optical maps.
   Belser, C., Istace, B., Denis, E. et al. Nature Plants 4, 879–887 (2018).

2. Sequencing and Chromosome-Scale Assembly of Plant Genomes, Brassica rapa as a Use Case.
   Istace, B.; Belser, C.; Falentin, C.; Labadie, K.; Boideau, F.; Deniot, G.; Maillet, L.; Cruaud, C.; Bertrand, L.; Chèvre, A.-M.; et al. Biology 2021, 10, 732.

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