Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: AT5G42340.1 PUB15-201

Description

Plant U-Box 15 [Source:NCBI gene (formerly Entrezgene);Acc:834240]

Location

About this transcript

This transcript has 4 exons, is annotated with 27 domains and features and is associated with 432 variant alleles.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
PUB15-201	AT5G42340.1	2341	660aa	AT5G42340.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S9YAF7 Q681N2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 2,341 bps, Translation length: 660 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q681N2

Version

AT5G42340.1

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.