Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Transcript: AT5G11190.1 SHN2-201

Description

Integrase-type DNA-binding superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:830989]

Location

About this transcript

This transcript has 2 exons, is annotated with 13 domains and features and is associated with 158 variant alleles.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
SHN2-201	AT5G11190.1	931	189aa	AT5G11190.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654G036 Q9LFN7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 931 bps, Translation length: 189 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9LFN7

Version

AT5G11190.1

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.