Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Transcript: AT5G06140.1 SNX1-201

Description

sorting nexin 1 [Source:NCBI gene (formerly Entrezgene);Acc:830501]

Location

About this transcript

This transcript has 10 exons, is annotated with 18 domains and features and is associated with 139 variant alleles.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
SNX1-201	AT5G06140.1	1577	402aa	AT5G06140.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178UD05 Q9FG38	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,577 bps, Translation length: 402 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9FG38

Version

AT5G06140.1

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.