Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: AT4G15560.1 CLA1-201

Description

Deoxyxylulose-5-phosphate synthase [Source:NCBI gene (formerly Entrezgene);Acc:827230]

Location

About this transcript

This transcript has 9 exons, is annotated with 24 domains and features and is associated with 424 variant alleles.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CLA1-201	AT4G15560.1	2960	717aa	AT4G15560.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178V5I0 Q38854	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,960 bps, Translation length: 717 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q38854

Version

AT4G15560.1

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.