Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: AT3G48950.1 AT3G48950-201

Description

Pectin lyase-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:824056]

Location

About this transcript

This transcript has 5 exons, is annotated with 17 domains and features and is associated with 274 variant alleles.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT3G48950-201	AT3G48950.1	1525	469aa	AT3G48950.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A384LBD5 Q9SMT3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,525 bps, Translation length: 469 residues

Version

AT3G48950.1

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.