Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: AT3G18480.1 CASP-201

Description

CCAAT-displacement protein alternatively spliced product [Source:NCBI gene (formerly Entrezgene);Acc:821377]

Location

About this transcript

This transcript has 19 exons, is annotated with 23 domains and features and is associated with 420 variant alleles.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CASP-201	AT3G18480.1	2494	689aa	AT3G18480.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S9XDV8 Q9LS42	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 2,494 bps, Translation length: 689 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9LS42

Version

AT3G18480.1

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.