Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: AT2G39260.1 AT2G39260-201

Description

regulator of nonsense transcripts UPF2 [Source:NCBI gene (formerly Entrezgene);Acc:818511]

Location

About this transcript

This transcript has 17 exons, is annotated with 39 domains and features and is associated with 374 variant alleles.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT2G39260-201	AT2G39260.1	4134	1181aa	AT2G39260.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178W2N7 F4IUX6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 4,134 bps, Translation length: 1,181 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: F4IUX6

Version

AT2G39260.1

Type

Protein coding

Annotation Method

Gene annotation by ARAPORT through a process of automatic and manual curation.