Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
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Literature
Plant Compara
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Ensembl Plants is produced in collaboration with Gramene

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Gene: AT5G19390

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Description

Rho GTPase activation protein (RhoGAP) with PH domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:832059]

Gene Synonyms

F7K24.140, F7K24_140

Location

Chromosome 5: 6,531,529-6,538,557 forward strand.

About this gene

This gene has 4 transcripts (splice variants), 258 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
AT5G19390-201	AT5G19390.2	3341	870aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8RWQ4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT5G19390-204	AT5G19390.3	3249	822aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4K142	-	-
AT5G19390-202	AT5G19390.1	3182	870aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8RWQ4	-	-
AT5G19390-203	AT5G19390.4	2841	714aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

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Variant table

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Variant table

This table shows known variants for this gene. Use the 'Consequence Type' filter to view a subset of these.

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Variant ID	Chr: bp	Alleles	Class	Source	Evidence	Clin. Sig.	Conseq. Type	AA	AA coord	SIFT	Transcript

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