Gene: AT2G36130

Description

Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein [Source:NCBI gene (formerly Entrezgene);Acc:818186]

Gene Synonyms

F9C22.6, F9C22_6

Location

Chromosome 2: 15,166,720-15,168,497 forward strand.

About this gene

This gene has 1 transcript (splice variant), 143 orthologues and 28 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	UniProt	RefSeq	Flags
AT2G36130-201	AT2G36130.1	876	164aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654F9X6 Q9SIH1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

ENSVATH00261623	2:15166520	A/G	SNP	The 1001 Genomes Project	-	-	A sequence variant located 5' of a geneupstream gene variant	-	-	-	AT2G36130.1
tmp_2_15166526_G_T	2:15166526	G/T	SNP	The 1001 Genomes Project	-	-	A sequence variant located 5' of a geneupstream gene variant	-	-	-	AT2G36130.1
tmp_2_15166548_TTGATTTGGTACA_T	2:15166549-15166560	TGATTTGGTACA/-	deletion	The 1001 Genomes Project	-	-	A sequence variant located 5' of a geneupstream gene variant	-	-	-	AT2G36130.1
tmp_2_15166550_G_C	2:15166550	G/C	SNP	The 1001 Genomes Project	-	-	A sequence variant located 5' of a geneupstream gene variant	-	-	-	AT2G36130.1
tmp_2_15166576_A_G	2:15166576	A/G	SNP	The 1001 Genomes Project	-	-	A sequence variant located 5' of a geneupstream gene variant	-	-	-	AT2G36130.1
ENSVATH05663497	2:15166596	A/T	SNP	The 1001 Genomes Project	-	-	A sequence variant located 5' of a geneupstream gene variant	-	-	-	AT2G36130.1
ENSVATH05663498	2:15166602	A/G	SNP	The 1001 Genomes Project	-	-	A sequence variant located 5' of a geneupstream gene variant	-	-	-	AT2G36130.1
ENSVATH13546352	2:15166603	A/C	SNP	The 1001 Genomes Project	-	-	A sequence variant located 5' of a geneupstream gene variant	-	-	-	AT2G36130.1
tmp_2_15166612_G_T	2:15166612	G/T	SNP	The 1001 Genomes Project	-	-	A sequence variant located 5' of a geneupstream gene variant	-	-	-	AT2G36130.1
tmp_2_15166613_GT_G	2:15166614	T/-	deletion	The 1001 Genomes Project	-	-	A sequence variant located 5' of a geneupstream gene variant	-	-	-	AT2G36130.1
ENSVATH05663499	2:15166628	A/G	SNP	The 1001 Genomes Project	-	-	A sequence variant located 5' of a geneupstream gene variant	-	-	-	AT2G36130.1
ENSVATH05663500	2:15166691	T/C	SNP	The 1001 Genomes Project	-	-	A sequence variant located 5' of a geneupstream gene variant	-	-	-	AT2G36130.1
ENSVATH05663501	2:15166731	C/T	SNP	The 1001 Genomes Project	-	-	A UTR variant of the 5' UTR5 prime UTR variant	-	-	-	AT2G36130.1
tmp_2_15166745_C_T	2:15166745	C/T	SNP	The 1001 Genomes Project	-	-	A UTR variant of the 5' UTR5 prime UTR variant	-	-	-	AT2G36130.1
ENSVATH00261624	2:15166756	G/A	SNP	The 1001 Genomes Project	-	-	A UTR variant of the 5' UTR5 prime UTR variant	-	-	-	AT2G36130.1
ENSVATH05663502	2:15166796	C/G	SNP	The 1001 Genomes Project	-	-	A UTR variant of the 5' UTR5 prime UTR variant	-	-	-	AT2G36130.1
ENSVATH00261625	2:15166800	A/C	SNP	The 1001 Genomes Project	-	-	A UTR variant of the 5' UTR5 prime UTR variant	-	-	-	AT2G36130.1
ENSVATH00261626	2:15166804	A/T	SNP	The 1001 Genomes Project	-	-	A UTR variant of the 5' UTR5 prime UTR variant	-	-	-	AT2G36130.1
tmp_2_15166812_G_T	2:15166812	G/T	SNP	The 1001 Genomes Project	-	-	A UTR variant of the 5' UTR5 prime UTR variant	-	-	-	AT2G36130.1
ENSVATH05663503	2:15166814	T/C	SNP	The 1001 Genomes Project	-	-	A UTR variant of the 5' UTR5 prime UTR variant	-	-	-	AT2G36130.1
tmp_2_15166831_C_T	2:15166831	C/T	SNP	The 1001 Genomes Project	-	-	A UTR variant of the 5' UTR5 prime UTR variant	-	-	-	AT2G36130.1
ENSVATH00261627	2:15166834	T/C	SNP	The 1001 Genomes Project	-	-	A UTR variant of the 5' UTR5 prime UTR variant	-	-	-	AT2G36130.1
ENSVATH09705443	2: between 15166836 & 15166837	-/TC	insertion	The 1001 Genomes Project	-	-	A UTR variant of the 5' UTR5 prime UTR variant	-	-	-	AT2G36130.1
tmp_2_15166849_T_C	2:15166849	T/C	SNP	The 1001 Genomes Project	-	-	A UTR variant of the 5' UTR5 prime UTR variant	-	-	-	AT2G36130.1
ENSVATH00261628	2:15166858	G/A	SNP	The 1001 Genomes Project	-	-	A UTR variant of the 5' UTR5 prime UTR variant	-	-	-	AT2G36130.1
tmp_2_15166873_G_A	2:15166873	G/A	SNP	The 1001 Genomes Project	-	-	A sequence variant, that changes one or more bases, resulting in a different amino acid sequence but where the length is preservedmissense variant	R/K	4	0.93	AT2G36130.1
ENSVATH01954548	2:15166886	T/C	SNP	The 1001 Genomes Project	-	-	A sequence variant where there is no resulting change to the encoded amino acidsynonymous variant	S	8	-	AT2G36130.1
tmp_2_15166895_G_A	2:15166895	G/A	SNP	The 1001 Genomes Project	-	-	A sequence variant where there is no resulting change to the encoded amino acidsynonymous variant	E	11	-	AT2G36130.1
tmp_2_15166950_T_C	2:15166950	T/C	SNP	The 1001 Genomes Project	-	-	A transcript variant occurring within an intronintron variant	-	-	-	AT2G36130.1
ENSVATH00261629	2:15166964	G/A	SNP	The 1001 Genomes Project	-	-	A transcript variant occurring within an intronintron variant	-	-	-	AT2G36130.1
tmp_2_15166966_T_C	2:15166966	T/C	SNP	The 1001 Genomes Project	-	-	A transcript variant occurring within an intronintron variant	-	-	-	AT2G36130.1
ENSVATH14589241	2:15166980	T/C	SNP	The 1001 Genomes Project	-	-	A transcript variant occurring within an intronintron variant	-	-	-	AT2G36130.1
ENSVATH05663504	2:15166995	T/A	SNP	The 1001 Genomes Project	-	-	A transcript variant occurring within an intronintron variant	-	-	-	AT2G36130.1
tmp_2_15167004_G_C	2:15167004	G/C	SNP	The 1001 Genomes Project	-	-	A transcript variant occurring within an intronintron variant	-	-	-	AT2G36130.1
tmp_2_15167051_AT_A	2:15167052	T/-	deletion	The 1001 Genomes Project	-	-	A transcript variant occurring within an intronintron variant	-	-	-	AT2G36130.1
ENSVATH05663505	2:15167053	T/A	SNP	The 1001 Genomes Project	-	-	A transcript variant occurring within an intronintron variant	-	-	-	AT2G36130.1
tmp_2_15167055_C_T	2:15167055	C/T	SNP	The 1001 Genomes Project	-	-	A transcript variant occurring within an intronintron variant	-	-	-	AT2G36130.1
tmp_2_15167062_A_AT	2: between 15167062 & 15167063	-/T	insertion	The 1001 Genomes Project	-	-	A transcript variant occurring within an intronintron variant	-	-	-	AT2G36130.1
ENSVATH00261630	2:15167075	C/T	SNP	The 1001 Genomes Project	-	-	A transcript variant occurring within an intronintron variant	-	-	-	AT2G36130.1
ENSVATH05663506	2:15167084	A/C	SNP	The 1001 Genomes Project	-	-	A transcript variant occurring within an intronintron variant	-	-	-	AT2G36130.1
tmp_2_15167086_T_A	2:15167086	T/A	SNP	The 1001 Genomes Project	-	-	A transcript variant occurring within an intronintron variant	-	-	-	AT2G36130.1
ENSVATH05663507	2:15167090	G/T	SNP	The 1001 Genomes Project	-	-	A transcript variant occurring within an intronintron variant	-	-	-	AT2G36130.1
tmp_2_15167095_T_G	2:15167095	T/G	SNP	The 1001 Genomes Project	-	-	A transcript variant occurring within an intronintron variant	-	-	-	AT2G36130.1
ENSVATH01954549	2:15167106	T/G	SNP	The 1001 Genomes Project	-	-	A transcript variant occurring within an intronintron variant	-	-	-	AT2G36130.1
ENSVATH05663509	2:15167111	G/A	SNP	The 1001 Genomes Project	-	-	A transcript variant occurring within an intronintron variant	-	-	-	AT2G36130.1
ENSVATH05663510	2:15167113	G/T	SNP	The 1001 Genomes Project	-	-	A transcript variant occurring within an intronintron variant	-	-	-	AT2G36130.1
tmp_2_15167140_A_T	2:15167140	A/T	SNP	The 1001 Genomes Project	-	-	A transcript variant occurring within an intronintron variant	-	-	-	AT2G36130.1
tmp_2_15167226_T_G	2:15167226	T/G	SNP	The 1001 Genomes Project	-	-	A sequence variant where there is no resulting change to the encoded amino acidsynonymous variant	V	49	-	AT2G36130.1
tmp_2_15167229_G_A	2:15167229	G/A	SNP	The 1001 Genomes Project	-	-	A sequence variant where there is no resulting change to the encoded amino acidsynonymous variant	L	50	-	AT2G36130.1
ENSVATH05663511	2:15167235	C/T	SNP	The 1001 Genomes Project	-	-	A sequence variant where there is no resulting change to the encoded amino acidsynonymous variant	H	52	-	AT2G36130.1

Variant table

Variant table

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Gene: AT2G36130

Variant table

Variant table

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