Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

Ensembl Plants is produced in collaboration with Gramene

.

Gene: AT1G48090

.

Description

calcium-dependent lipid-binding family protein [Source:NCBI gene (formerly Entrezgene);Acc:841226]

Location

Chromosome 1: 17,732,010-17,758,508 reverse strand.

About this gene

This gene has 6 transcripts (splice variants), 182 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
AT1G48090-202	AT1G48090.2	13076	4173aa	AT1G48090.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AMQ1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
AT1G48090-204	AT1G48090.3	13023	4154aa	AT1G48090.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AMP6	-	-
AT1G48090-205	AT1G48090.4	13017	4132aa	AT1G48090.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AMP4 A0A384LIM1	-	-
AT1G48090-203	AT1G48090.1	12995	4146aa	AT1G48090.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4HWS2	-	-
AT1G48090-206	AT1G48090.6	12880	4132aa	AT1G48090.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AMP4 A0A384LIM1	-	-
AT1G48090-201	AT1G48090.5	12872	4105aa	AT1G48090.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1P8AMQ8	-	-

.

Summary

.

.